Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Trim47Q8C0E3 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trim47Q8C0E3 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim47Q8C0E3 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim47Q8C0E3 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim47Q8C0E3 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim47Q8C0E3 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Trim47Q8C0E3 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim47Q8C0E3 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim47Q8C0E3 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim47Q8C0E3 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
Trim47Q8C0E3 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Trim47Q8C0E3 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
Trim47Q8C0E3 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim47Q8C0E3 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Trim47Q8C0E3 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim47Q8C0E3 Gm12579-201ENSMUST00000118040 783 ntBASIC13.14□□□□□ -0.31
Trim47Q8C0E3 Gm15595-201ENSMUST00000120840 961 ntBASIC13.14□□□□□ -0.31
Trim47Q8C0E3 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC13.14□□□□□ -0.31
Trim47Q8C0E3 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trim47Q8C0E3 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC13.14□□□□□ -0.31
Trim47Q8C0E3 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC13.14□□□□□ -0.31
Trim47Q8C0E3 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Trim47Q8C0E3 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trim47Q8C0E3 Gm37641-201ENSMUST00000193837 239 ntBASIC13.14□□□□□ -0.31
Trim47Q8C0E3 Gm5714-201ENSMUST00000197343 566 ntBASIC13.14□□□□□ -0.31
Trim47Q8C0E3 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim47Q8C0E3 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC13.14□□□□□ -0.31
Trim47Q8C0E3 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim47Q8C0E3 Olfr1437-201ENSMUST00000052558 1177 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Trim47Q8C0E3 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trim47Q8C0E3 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Trim47Q8C0E3 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim47Q8C0E3 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Trim47Q8C0E3 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim47Q8C0E3 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim47Q8C0E3 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trim47Q8C0E3 AC157950.1-201ENSMUST00000217561 2168 ntBASIC13.14□□□□□ -0.31
Trim47Q8C0E3 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC13.14□□□□□ -0.31
Trim47Q8C0E3 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Trim47Q8C0E3 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim47Q8C0E3 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim47Q8C0E3 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC13.13□□□□□ -0.31
Trim47Q8C0E3 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim47Q8C0E3 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim47Q8C0E3 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim47Q8C0E3 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim47Q8C0E3 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Trim47Q8C0E3 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Trim47Q8C0E3 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim47Q8C0E3 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim47Q8C0E3 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim47Q8C0E3 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Trim47Q8C0E3 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trim47Q8C0E3 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim47Q8C0E3 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trim47Q8C0E3 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim47Q8C0E3 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trim47Q8C0E3 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC13.13□□□□□ -0.31
Trim47Q8C0E3 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trim47Q8C0E3 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Trim47Q8C0E3 Gm21147-201ENSMUST00000186046 913 ntBASIC13.13□□□□□ -0.31
Trim47Q8C0E3 Gm37835-201ENSMUST00000193305 361 ntBASIC13.13□□□□□ -0.31
Trim47Q8C0E3 Gm6905-201ENSMUST00000205729 511 ntBASIC13.13□□□□□ -0.31
Trim47Q8C0E3 Gm45118-201ENSMUST00000208928 825 ntBASIC13.13□□□□□ -0.31
Trim47Q8C0E3 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trim47Q8C0E3 AC159819.2-201ENSMUST00000216151 342 ntBASIC13.13□□□□□ -0.31
Trim47Q8C0E3 Il2-201ENSMUST00000029275 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim47Q8C0E3 Gm6781-201ENSMUST00000038304 1242 ntBASIC13.13□□□□□ -0.31
Trim47Q8C0E3 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim47Q8C0E3 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim47Q8C0E3 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Trim47Q8C0E3 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim47Q8C0E3 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trim47Q8C0E3 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim47Q8C0E3 Gm1995-201ENSMUST00000220838 2602 ntBASIC13.13□□□□□ -0.31
Trim47Q8C0E3 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim47Q8C0E3 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Trim47Q8C0E3 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
Trim47Q8C0E3 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim47Q8C0E3 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trim47Q8C0E3 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trim47Q8C0E3 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim47Q8C0E3 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Trim47Q8C0E3 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Trim47Q8C0E3 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim47Q8C0E3 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim47Q8C0E3 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trim47Q8C0E3 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC13.12□□□□□ -0.31
Trim47Q8C0E3 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim47Q8C0E3 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim47Q8C0E3 Sox5it-201ENSMUST00000144026 1207 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trim47Q8C0E3 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC13.12□□□□□ -0.31
Trim47Q8C0E3 Gm8815-201ENSMUST00000173809 620 ntBASIC13.12□□□□□ -0.31
Trim47Q8C0E3 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Trim47Q8C0E3 Gm8546-201ENSMUST00000178288 1264 ntBASIC13.12□□□□□ -0.31
Trim47Q8C0E3 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
Trim47Q8C0E3 Gm16701-202ENSMUST00000180995 934 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trim47Q8C0E3 Gm45462-201ENSMUST00000211267 792 ntTSL 5 BASIC13.12□□□□□ -0.31
Trim47Q8C0E3 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms