Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Scfd1Q8BRF7 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Scfd1Q8BRF7 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Scfd1Q8BRF7 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC13.48□□□□□ -0.25
Scfd1Q8BRF7 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Scfd1Q8BRF7 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC13.48□□□□□ -0.25
Scfd1Q8BRF7 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scfd1Q8BRF7 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scfd1Q8BRF7 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scfd1Q8BRF7 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC13.48□□□□□ -0.25
Scfd1Q8BRF7 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC13.48□□□□□ -0.25
Scfd1Q8BRF7 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Scfd1Q8BRF7 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scfd1Q8BRF7 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC13.48□□□□□ -0.25
Scfd1Q8BRF7 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC13.48□□□□□ -0.25
Scfd1Q8BRF7 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC13.48□□□□□ -0.25
Scfd1Q8BRF7 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Scfd1Q8BRF7 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC13.48□□□□□ -0.25
Scfd1Q8BRF7 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC13.48□□□□□ -0.25
Scfd1Q8BRF7 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC13.48□□□□□ -0.25
Scfd1Q8BRF7 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scfd1Q8BRF7 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scfd1Q8BRF7 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC13.48□□□□□ -0.25
Scfd1Q8BRF7 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scfd1Q8BRF7 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scfd1Q8BRF7 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Scfd1Q8BRF7 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scfd1Q8BRF7 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scfd1Q8BRF7 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scfd1Q8BRF7 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC13.48□□□□□ -0.25
Scfd1Q8BRF7 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Scfd1Q8BRF7 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Scfd1Q8BRF7 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Scfd1Q8BRF7 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Scfd1Q8BRF7 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Scfd1Q8BRF7 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Scfd1Q8BRF7 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Scfd1Q8BRF7 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Scfd1Q8BRF7 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Scfd1Q8BRF7 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
Scfd1Q8BRF7 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC13.47□□□□□ -0.25
Scfd1Q8BRF7 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Scfd1Q8BRF7 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Scfd1Q8BRF7 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Scfd1Q8BRF7 Gm23272-201ENSMUST00000104053 129 ntBASIC13.47□□□□□ -0.25
Scfd1Q8BRF7 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Scfd1Q8BRF7 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC13.47□□□□□ -0.25
Scfd1Q8BRF7 Gm11244-201ENSMUST00000121243 237 ntBASIC13.47□□□□□ -0.25
Scfd1Q8BRF7 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC13.47□□□□□ -0.25
Scfd1Q8BRF7 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Scfd1Q8BRF7 Gm5778-201ENSMUST00000171003 1072 ntBASIC13.47□□□□□ -0.25
Scfd1Q8BRF7 Gm9358-201ENSMUST00000183067 927 ntBASIC13.47□□□□□ -0.25
Scfd1Q8BRF7 Gm38314-201ENSMUST00000195709 625 ntBASIC13.47□□□□□ -0.25
Scfd1Q8BRF7 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Scfd1Q8BRF7 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC13.47□□□□□ -0.25
Scfd1Q8BRF7 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Scfd1Q8BRF7 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Scfd1Q8BRF7 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Scfd1Q8BRF7 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Scfd1Q8BRF7 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Scfd1Q8BRF7 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Scfd1Q8BRF7 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Scfd1Q8BRF7 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Scfd1Q8BRF7 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Scfd1Q8BRF7 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Scfd1Q8BRF7 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Scfd1Q8BRF7 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Scfd1Q8BRF7 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Scfd1Q8BRF7 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Scfd1Q8BRF7 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Scfd1Q8BRF7 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Scfd1Q8BRF7 Gm8146-201ENSMUST00000192106 1847 ntBASIC13.46□□□□□ -0.25
Scfd1Q8BRF7 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Scfd1Q8BRF7 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Scfd1Q8BRF7 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC13.46□□□□□ -0.25
Scfd1Q8BRF7 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Scfd1Q8BRF7 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Scfd1Q8BRF7 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Scfd1Q8BRF7 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Scfd1Q8BRF7 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Scfd1Q8BRF7 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.25
Scfd1Q8BRF7 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Scfd1Q8BRF7 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC13.46□□□□□ -0.25
Scfd1Q8BRF7 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
Scfd1Q8BRF7 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Scfd1Q8BRF7 Gm15615-201ENSMUST00000118876 198 ntBASIC13.46□□□□□ -0.25
Scfd1Q8BRF7 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Scfd1Q8BRF7 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC13.46□□□□□ -0.25
Scfd1Q8BRF7 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC13.46□□□□□ -0.25
Scfd1Q8BRF7 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC13.46□□□□□ -0.25
Scfd1Q8BRF7 Gm44315-201ENSMUST00000203041 219 ntBASIC13.46□□□□□ -0.25
Scfd1Q8BRF7 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Scfd1Q8BRF7 Gm2875-201ENSMUST00000211333 360 ntBASIC13.46□□□□□ -0.25
Scfd1Q8BRF7 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Scfd1Q8BRF7 CT009546.1-201ENSMUST00000222573 1120 ntBASIC13.46□□□□□ -0.25
Scfd1Q8BRF7 AC124433.1-201ENSMUST00000224483 1063 ntBASIC13.46□□□□□ -0.25
Scfd1Q8BRF7 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Scfd1Q8BRF7 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Scfd1Q8BRF7 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Scfd1Q8BRF7 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms