Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col16a1Q8BLX7 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Col16a1Q8BLX7 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Col16a1Q8BLX7 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col16a1Q8BLX7 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col16a1Q8BLX7 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Col16a1Q8BLX7 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Col16a1Q8BLX7 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col16a1Q8BLX7 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col16a1Q8BLX7 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col16a1Q8BLX7 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col16a1Q8BLX7 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Col16a1Q8BLX7 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col16a1Q8BLX7 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC15.23■□□□□ 0.03
Col16a1Q8BLX7 Gm13783-201ENSMUST00000131634 732 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Col16a1Q8BLX7 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Col16a1Q8BLX7 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Col16a1Q8BLX7 Ly6e-207ENSMUST00000187606 735 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Col16a1Q8BLX7 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC15.23■□□□□ 0.03
Col16a1Q8BLX7 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC15.23■□□□□ 0.03
Col16a1Q8BLX7 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC15.23■□□□□ 0.03
Col16a1Q8BLX7 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC15.23■□□□□ 0.03
Col16a1Q8BLX7 Selenos-204ENSMUST00000206044 911 ntTSL 3 BASIC15.23■□□□□ 0.03
Col16a1Q8BLX7 Gm46224-201ENSMUST00000220221 1242 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Col16a1Q8BLX7 Id2-203ENSMUST00000222667 958 ntBASIC15.23■□□□□ 0.03
Col16a1Q8BLX7 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Col16a1Q8BLX7 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC15.23■□□□□ 0.03
Col16a1Q8BLX7 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col16a1Q8BLX7 AC174797.1-201ENSMUST00000224339 1649 ntBASIC15.22■□□□□ 0.03
Col16a1Q8BLX7 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col16a1Q8BLX7 Smap1-202ENSMUST00000129254 1365 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Col16a1Q8BLX7 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col16a1Q8BLX7 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col16a1Q8BLX7 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col16a1Q8BLX7 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Col16a1Q8BLX7 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col16a1Q8BLX7 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Col16a1Q8BLX7 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col16a1Q8BLX7 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col16a1Q8BLX7 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col16a1Q8BLX7 Ppp2r2cos-201ENSMUST00000152862 1491 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Col16a1Q8BLX7 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col16a1Q8BLX7 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Col16a1Q8BLX7 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col16a1Q8BLX7 Gm9133-201ENSMUST00000118289 540 ntBASIC15.22■□□□□ 0.03
Col16a1Q8BLX7 Ube2d-ps-201ENSMUST00000121354 441 ntBASIC15.22■□□□□ 0.03
Col16a1Q8BLX7 Mir432-201ENSMUST00000157230 75 ntBASIC15.22■□□□□ 0.03
Col16a1Q8BLX7 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Col16a1Q8BLX7 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Col16a1Q8BLX7 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC15.22■□□□□ 0.03
Col16a1Q8BLX7 Gm5907-202ENSMUST00000210969 661 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Col16a1Q8BLX7 Gm8255-201ENSMUST00000218693 305 ntBASIC15.22■□□□□ 0.03
Col16a1Q8BLX7 D730050B12Rik-201ENSMUST00000223149 585 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Col16a1Q8BLX7 AC122035.1-201ENSMUST00000227576 1016 ntBASIC15.22■□□□□ 0.03
Col16a1Q8BLX7 Gm9758-201ENSMUST00000035980 1167 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col16a1Q8BLX7 Nkg7-201ENSMUST00000070518 881 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col16a1Q8BLX7 Prr19-201ENSMUST00000080288 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col16a1Q8BLX7 Krtap12-1-201ENSMUST00000092370 656 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Col16a1Q8BLX7 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col16a1Q8BLX7 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Col16a1Q8BLX7 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col16a1Q8BLX7 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col16a1Q8BLX7 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Col16a1Q8BLX7 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col16a1Q8BLX7 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col16a1Q8BLX7 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
Col16a1Q8BLX7 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col16a1Q8BLX7 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col16a1Q8BLX7 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col16a1Q8BLX7 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col16a1Q8BLX7 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Col16a1Q8BLX7 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Col16a1Q8BLX7 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC15.22■□□□□ 0.03
Col16a1Q8BLX7 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col16a1Q8BLX7 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col16a1Q8BLX7 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
Col16a1Q8BLX7 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Col16a1Q8BLX7 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col16a1Q8BLX7 B2m-201ENSMUST00000102476 860 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col16a1Q8BLX7 Gm6158-201ENSMUST00000109467 904 ntBASIC15.21■□□□□ 0.03
Col16a1Q8BLX7 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Col16a1Q8BLX7 Snord23-201ENSMUST00000116828 109 ntBASIC15.21■□□□□ 0.03
Col16a1Q8BLX7 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col16a1Q8BLX7 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
Col16a1Q8BLX7 4933417D19Rik-201ENSMUST00000181432 1229 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Col16a1Q8BLX7 Gm31274-201ENSMUST00000197356 229 ntBASIC15.21■□□□□ 0.03
Col16a1Q8BLX7 Gm20735-202ENSMUST00000212387 519 ntTSL 2 BASIC15.21■□□□□ 0.03
Col16a1Q8BLX7 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC15.21■□□□□ 0.03
Col16a1Q8BLX7 AC170597.1-201ENSMUST00000221956 440 ntTSL 2 BASIC15.21■□□□□ 0.03
Col16a1Q8BLX7 Arhgef33-210ENSMUST00000225548 456 ntBASIC15.21■□□□□ 0.03
Col16a1Q8BLX7 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col16a1Q8BLX7 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Col16a1Q8BLX7 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col16a1Q8BLX7 Gm6024-201ENSMUST00000117850 1558 ntBASIC15.21■□□□□ 0.03
Col16a1Q8BLX7 Lonp2-207ENSMUST00000163987 1556 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Col16a1Q8BLX7 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col16a1Q8BLX7 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col16a1Q8BLX7 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col16a1Q8BLX7 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col16a1Q8BLX7 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms