Protein–RNA interactions for Protein: Q8BI41

Synb, Syncytin-B, mousemouse

Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynbQ8BI41 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
SynbQ8BI41 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SynbQ8BI41 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
SynbQ8BI41 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
SynbQ8BI41 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
SynbQ8BI41 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
SynbQ8BI41 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
SynbQ8BI41 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SynbQ8BI41 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC11.36□□□□□ -0.59
SynbQ8BI41 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SynbQ8BI41 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC11.36□□□□□ -0.59
SynbQ8BI41 H2-Q3-201ENSMUST00000172583 608 ntBASIC11.36□□□□□ -0.59
SynbQ8BI41 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
SynbQ8BI41 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SynbQ8BI41 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
SynbQ8BI41 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
SynbQ8BI41 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC11.36□□□□□ -0.59
SynbQ8BI41 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC11.36□□□□□ -0.59
SynbQ8BI41 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC11.36□□□□□ -0.59
SynbQ8BI41 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC11.36□□□□□ -0.59
SynbQ8BI41 AC154849.4-201ENSMUST00000224868 365 ntBASIC11.36□□□□□ -0.59
SynbQ8BI41 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SynbQ8BI41 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SynbQ8BI41 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC11.36□□□□□ -0.59
SynbQ8BI41 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SynbQ8BI41 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SynbQ8BI41 Gm44999-201ENSMUST00000207456 1493 ntBASIC11.36□□□□□ -0.59
SynbQ8BI41 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC11.36□□□□□ -0.59
SynbQ8BI41 AC123619.2-202ENSMUST00000225097 1568 ntBASIC11.36□□□□□ -0.59
SynbQ8BI41 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SynbQ8BI41 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
SynbQ8BI41 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
SynbQ8BI41 Gm36987-201ENSMUST00000194704 2979 ntBASIC11.36□□□□□ -0.59
SynbQ8BI41 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SynbQ8BI41 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SynbQ8BI41 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SynbQ8BI41 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SynbQ8BI41 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SynbQ8BI41 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
SynbQ8BI41 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
SynbQ8BI41 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
SynbQ8BI41 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SynbQ8BI41 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC11.35□□□□□ -0.59
SynbQ8BI41 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC11.35□□□□□ -0.59
SynbQ8BI41 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SynbQ8BI41 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
SynbQ8BI41 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
SynbQ8BI41 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SynbQ8BI41 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SynbQ8BI41 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
SynbQ8BI41 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SynbQ8BI41 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SynbQ8BI41 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SynbQ8BI41 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
SynbQ8BI41 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
SynbQ8BI41 Gm24934-201ENSMUST00000103764 111 ntBASIC11.35□□□□□ -0.59
SynbQ8BI41 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
SynbQ8BI41 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC11.35□□□□□ -0.59
SynbQ8BI41 Gm11667-201ENSMUST00000119828 486 ntBASIC11.35□□□□□ -0.59
SynbQ8BI41 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC11.35□□□□□ -0.59
SynbQ8BI41 Gm10051-201ENSMUST00000145209 414 ntBASIC11.35□□□□□ -0.59
SynbQ8BI41 Ighv4-2-201ENSMUST00000192975 362 ntBASIC11.35□□□□□ -0.59
SynbQ8BI41 Gm4482-201ENSMUST00000200876 742 ntBASIC11.35□□□□□ -0.59
SynbQ8BI41 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
SynbQ8BI41 Gm43916-201ENSMUST00000205062 967 ntBASIC11.35□□□□□ -0.59
SynbQ8BI41 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
SynbQ8BI41 Gm8285-201ENSMUST00000208293 759 ntBASIC11.35□□□□□ -0.59
SynbQ8BI41 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC11.35□□□□□ -0.59
SynbQ8BI41 AC154305.4-201ENSMUST00000224520 614 ntBASIC11.35□□□□□ -0.59
SynbQ8BI41 AC135469.1-201ENSMUST00000225984 772 ntBASIC11.35□□□□□ -0.59
SynbQ8BI41 AC159103.1-201ENSMUST00000228325 429 ntBASIC11.35□□□□□ -0.59
SynbQ8BI41 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
SynbQ8BI41 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
SynbQ8BI41 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC11.35□□□□□ -0.59
SynbQ8BI41 Gm13142-201ENSMUST00000117213 1453 ntBASIC11.35□□□□□ -0.59
SynbQ8BI41 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SynbQ8BI41 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
SynbQ8BI41 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC11.35□□□□□ -0.59
SynbQ8BI41 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC11.35□□□□□ -0.59
SynbQ8BI41 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SynbQ8BI41 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
SynbQ8BI41 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
SynbQ8BI41 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
SynbQ8BI41 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
SynbQ8BI41 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SynbQ8BI41 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC11.35□□□□□ -0.59
SynbQ8BI41 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SynbQ8BI41 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SynbQ8BI41 Gm13812-201ENSMUST00000118061 1347 ntBASIC11.35□□□□□ -0.59
SynbQ8BI41 Gm13810-201ENSMUST00000118584 1347 ntBASIC11.35□□□□□ -0.59
SynbQ8BI41 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC11.35□□□□□ -0.59
SynbQ8BI41 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC11.34□□□□□ -0.59
SynbQ8BI41 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
SynbQ8BI41 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SynbQ8BI41 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SynbQ8BI41 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SynbQ8BI41 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SynbQ8BI41 AC156031.2-201ENSMUST00000213107 3310 ntBASIC11.34□□□□□ -0.59
SynbQ8BI41 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
SynbQ8BI41 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms