Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Samm50Q8BGH2 Gm8856-201ENSMUST00000185254 1144 ntBASIC13.87□□□□□ -0.19
Samm50Q8BGH2 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC13.87□□□□□ -0.19
Samm50Q8BGH2 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC13.87□□□□□ -0.19
Samm50Q8BGH2 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC13.87□□□□□ -0.19
Samm50Q8BGH2 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
Samm50Q8BGH2 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC13.87□□□□□ -0.19
Samm50Q8BGH2 CT030182.1-201ENSMUST00000225935 533 ntBASIC13.87□□□□□ -0.19
Samm50Q8BGH2 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Samm50Q8BGH2 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Samm50Q8BGH2 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Samm50Q8BGH2 Gm8522-201ENSMUST00000118416 1929 ntBASIC13.87□□□□□ -0.19
Samm50Q8BGH2 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC13.87□□□□□ -0.19
Samm50Q8BGH2 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Samm50Q8BGH2 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Samm50Q8BGH2 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC13.87□□□□□ -0.19
Samm50Q8BGH2 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Samm50Q8BGH2 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
Samm50Q8BGH2 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Samm50Q8BGH2 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Samm50Q8BGH2 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC13.87□□□□□ -0.19
Samm50Q8BGH2 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Samm50Q8BGH2 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Samm50Q8BGH2 Crry-ps-201ENSMUST00000079090 1309 ntBASIC13.87□□□□□ -0.19
Samm50Q8BGH2 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Samm50Q8BGH2 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Samm50Q8BGH2 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Samm50Q8BGH2 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Samm50Q8BGH2 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC13.86□□□□□ -0.19
Samm50Q8BGH2 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Samm50Q8BGH2 Gm43447-201ENSMUST00000198471 1535 ntBASIC13.86□□□□□ -0.19
Samm50Q8BGH2 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Samm50Q8BGH2 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Samm50Q8BGH2 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC13.86□□□□□ -0.19
Samm50Q8BGH2 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Samm50Q8BGH2 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Samm50Q8BGH2 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Samm50Q8BGH2 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC13.86□□□□□ -0.19
Samm50Q8BGH2 Gm6963-201ENSMUST00000147879 379 ntBASIC13.86□□□□□ -0.19
Samm50Q8BGH2 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Samm50Q8BGH2 Rprl1-202ENSMUST00000198476 238 ntBASIC13.86□□□□□ -0.19
Samm50Q8BGH2 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Samm50Q8BGH2 Gm45691-201ENSMUST00000206905 1120 ntBASIC13.86□□□□□ -0.19
Samm50Q8BGH2 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC13.86□□□□□ -0.19
Samm50Q8BGH2 AC159747.1-201ENSMUST00000219903 265 ntBASIC13.86□□□□□ -0.19
Samm50Q8BGH2 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Samm50Q8BGH2 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Samm50Q8BGH2 Gm9996-201ENSMUST00000070359 913 ntBASIC13.86□□□□□ -0.19
Samm50Q8BGH2 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC13.86□□□□□ -0.19
Samm50Q8BGH2 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC13.86□□□□□ -0.19
Samm50Q8BGH2 Gm45495-201ENSMUST00000200940 1700 ntBASIC13.86□□□□□ -0.19
Samm50Q8BGH2 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Samm50Q8BGH2 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Samm50Q8BGH2 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Samm50Q8BGH2 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Samm50Q8BGH2 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Samm50Q8BGH2 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC13.86□□□□□ -0.19
Samm50Q8BGH2 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
Samm50Q8BGH2 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Samm50Q8BGH2 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Samm50Q8BGH2 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC13.86□□□□□ -0.19
Samm50Q8BGH2 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Samm50Q8BGH2 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Samm50Q8BGH2 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Samm50Q8BGH2 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Samm50Q8BGH2 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Samm50Q8BGH2 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Samm50Q8BGH2 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Samm50Q8BGH2 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Samm50Q8BGH2 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Samm50Q8BGH2 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Samm50Q8BGH2 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Samm50Q8BGH2 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Samm50Q8BGH2 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Samm50Q8BGH2 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Samm50Q8BGH2 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Samm50Q8BGH2 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Samm50Q8BGH2 Gm12015-201ENSMUST00000117065 843 ntBASIC13.85□□□□□ -0.19
Samm50Q8BGH2 Gm13296-201ENSMUST00000117854 997 ntBASIC13.85□□□□□ -0.19
Samm50Q8BGH2 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC13.85□□□□□ -0.19
Samm50Q8BGH2 Gm11434-201ENSMUST00000122379 629 ntBASIC13.85□□□□□ -0.19
Samm50Q8BGH2 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Samm50Q8BGH2 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC13.85□□□□□ -0.19
Samm50Q8BGH2 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Samm50Q8BGH2 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC13.85□□□□□ -0.19
Samm50Q8BGH2 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC13.85□□□□□ -0.19
Samm50Q8BGH2 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Samm50Q8BGH2 Gm7293-201ENSMUST00000216682 1007 ntBASIC13.85□□□□□ -0.19
Samm50Q8BGH2 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC13.85□□□□□ -0.19
Samm50Q8BGH2 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC13.85□□□□□ -0.19
Samm50Q8BGH2 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Samm50Q8BGH2 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Samm50Q8BGH2 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Samm50Q8BGH2 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC13.85□□□□□ -0.19
Samm50Q8BGH2 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Samm50Q8BGH2 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Samm50Q8BGH2 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Samm50Q8BGH2 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC13.85□□□□□ -0.19
Samm50Q8BGH2 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Samm50Q8BGH2 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms