Protein–RNA interactions for Protein: Q80XJ2

Rnf168, E3 ubiquitin-protein ligase RNF168, mousemouse

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf168Q80XJ2 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf168Q80XJ2 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf168Q80XJ2 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf168Q80XJ2 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Rnf168Q80XJ2 AC129336.1-201ENSMUST00000220224 2277 ntBASIC12.68□□□□□ -0.38
Rnf168Q80XJ2 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf168Q80XJ2 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rnf168Q80XJ2 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf168Q80XJ2 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf168Q80XJ2 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Rnf168Q80XJ2 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf168Q80XJ2 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf168Q80XJ2 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf168Q80XJ2 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Rnf168Q80XJ2 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf168Q80XJ2 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf168Q80XJ2 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
Rnf168Q80XJ2 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf168Q80XJ2 Gm14247-201ENSMUST00000120950 237 ntBASIC12.67□□□□□ -0.38
Rnf168Q80XJ2 Gm12208-201ENSMUST00000122004 163 ntBASIC12.67□□□□□ -0.38
Rnf168Q80XJ2 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf168Q80XJ2 Gm17391-201ENSMUST00000171036 126 ntBASIC12.67□□□□□ -0.38
Rnf168Q80XJ2 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Rnf168Q80XJ2 Gm27438-201ENSMUST00000183480 110 ntBASIC12.67□□□□□ -0.38
Rnf168Q80XJ2 Mir6546-201ENSMUST00000184460 62 ntBASIC12.67□□□□□ -0.38
Rnf168Q80XJ2 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
Rnf168Q80XJ2 Gm28686-201ENSMUST00000187404 609 ntBASIC12.67□□□□□ -0.38
Rnf168Q80XJ2 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf168Q80XJ2 Mir7686-201ENSMUST00000200604 57 ntBASIC12.67□□□□□ -0.38
Rnf168Q80XJ2 Gm44551-201ENSMUST00000208804 171 ntBASIC12.67□□□□□ -0.38
Rnf168Q80XJ2 AC166992.1-201ENSMUST00000216356 565 ntBASIC12.67□□□□□ -0.38
Rnf168Q80XJ2 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.67□□□□□ -0.38
Rnf168Q80XJ2 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC12.67□□□□□ -0.38
Rnf168Q80XJ2 AC159103.1-201ENSMUST00000228325 429 ntBASIC12.67□□□□□ -0.38
Rnf168Q80XJ2 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf168Q80XJ2 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf168Q80XJ2 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf168Q80XJ2 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf168Q80XJ2 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf168Q80XJ2 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf168Q80XJ2 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf168Q80XJ2 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf168Q80XJ2 Gm14132-201ENSMUST00000117188 1719 ntBASIC12.67□□□□□ -0.38
Rnf168Q80XJ2 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf168Q80XJ2 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Rnf168Q80XJ2 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf168Q80XJ2 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf168Q80XJ2 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf168Q80XJ2 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf168Q80XJ2 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf168Q80XJ2 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC12.67□□□□□ -0.38
Rnf168Q80XJ2 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf168Q80XJ2 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf168Q80XJ2 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf168Q80XJ2 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf168Q80XJ2 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf168Q80XJ2 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf168Q80XJ2 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf168Q80XJ2 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf168Q80XJ2 Gm13809-201ENSMUST00000117921 597 ntBASIC12.66□□□□□ -0.38
Rnf168Q80XJ2 Gm11667-201ENSMUST00000119828 486 ntBASIC12.66□□□□□ -0.38
Rnf168Q80XJ2 Gm12029-201ENSMUST00000120073 832 ntBASIC12.66□□□□□ -0.38
Rnf168Q80XJ2 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC12.66□□□□□ -0.38
Rnf168Q80XJ2 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf168Q80XJ2 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
Rnf168Q80XJ2 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC12.66□□□□□ -0.38
Rnf168Q80XJ2 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf168Q80XJ2 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC12.66□□□□□ -0.38
Rnf168Q80XJ2 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC12.66□□□□□ -0.38
Rnf168Q80XJ2 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf168Q80XJ2 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf168Q80XJ2 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf168Q80XJ2 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf168Q80XJ2 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf168Q80XJ2 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC12.66□□□□□ -0.38
Rnf168Q80XJ2 Gm8285-201ENSMUST00000208293 759 ntBASIC12.66□□□□□ -0.38
Rnf168Q80XJ2 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf168Q80XJ2 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.66□□□□□ -0.38
Rnf168Q80XJ2 AC151275.1-201ENSMUST00000224870 585 ntBASIC12.66□□□□□ -0.38
Rnf168Q80XJ2 AC121960.1-201ENSMUST00000227982 564 ntBASIC12.66□□□□□ -0.38
Rnf168Q80XJ2 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf168Q80XJ2 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf168Q80XJ2 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf168Q80XJ2 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Rnf168Q80XJ2 Gm5705-201ENSMUST00000066241 711 ntBASIC12.66□□□□□ -0.38
Rnf168Q80XJ2 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Rnf168Q80XJ2 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf168Q80XJ2 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.66□□□□□ -0.38
Rnf168Q80XJ2 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Rnf168Q80XJ2 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf168Q80XJ2 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.66□□□□□ -0.38
Rnf168Q80XJ2 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf168Q80XJ2 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC12.66□□□□□ -0.38
Rnf168Q80XJ2 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf168Q80XJ2 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf168Q80XJ2 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.66□□□□□ -0.38
Rnf168Q80XJ2 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf168Q80XJ2 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.66□□□□□ -0.38
Rnf168Q80XJ2 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf168Q80XJ2 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms