Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Usp6nlQ80XC3 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Usp6nlQ80XC3 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC13.07□□□□□ -0.32
Usp6nlQ80XC3 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Usp6nlQ80XC3 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Usp6nlQ80XC3 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Usp6nlQ80XC3 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
Usp6nlQ80XC3 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Usp6nlQ80XC3 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC13.07□□□□□ -0.32
Usp6nlQ80XC3 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC13.07□□□□□ -0.32
Usp6nlQ80XC3 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Usp6nlQ80XC3 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC13.07□□□□□ -0.32
Usp6nlQ80XC3 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Usp6nlQ80XC3 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Usp6nlQ80XC3 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Usp6nlQ80XC3 Gm3619-201ENSMUST00000219947 775 ntBASIC13.07□□□□□ -0.32
Usp6nlQ80XC3 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC13.07□□□□□ -0.32
Usp6nlQ80XC3 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC13.07□□□□□ -0.32
Usp6nlQ80XC3 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Usp6nlQ80XC3 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Usp6nlQ80XC3 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Usp6nlQ80XC3 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Usp6nlQ80XC3 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Usp6nlQ80XC3 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Usp6nlQ80XC3 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC13.07□□□□□ -0.32
Usp6nlQ80XC3 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Usp6nlQ80XC3 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Usp6nlQ80XC3 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Usp6nlQ80XC3 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Usp6nlQ80XC3 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Usp6nlQ80XC3 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Usp6nlQ80XC3 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Usp6nlQ80XC3 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Usp6nlQ80XC3 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Usp6nlQ80XC3 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC13.07□□□□□ -0.32
Usp6nlQ80XC3 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Usp6nlQ80XC3 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Usp6nlQ80XC3 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Usp6nlQ80XC3 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Usp6nlQ80XC3 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Usp6nlQ80XC3 Gm44152-201ENSMUST00000205007 1691 ntBASIC13.06□□□□□ -0.32
Usp6nlQ80XC3 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Usp6nlQ80XC3 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Usp6nlQ80XC3 Matn2-203ENSMUST00000226766 3252 ntBASIC13.06□□□□□ -0.32
Usp6nlQ80XC3 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Usp6nlQ80XC3 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Usp6nlQ80XC3 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC13.06□□□□□ -0.32
Usp6nlQ80XC3 n-R5s84-201ENSMUST00000122591 109 ntBASIC13.06□□□□□ -0.32
Usp6nlQ80XC3 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Usp6nlQ80XC3 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC13.06□□□□□ -0.32
Usp6nlQ80XC3 Gm25951-201ENSMUST00000175330 64 ntBASIC13.06□□□□□ -0.32
Usp6nlQ80XC3 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Usp6nlQ80XC3 Gm29410-201ENSMUST00000188383 694 ntBASIC13.06□□□□□ -0.32
Usp6nlQ80XC3 Gm44315-201ENSMUST00000203041 219 ntBASIC13.06□□□□□ -0.32
Usp6nlQ80XC3 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC13.06□□□□□ -0.32
Usp6nlQ80XC3 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC13.06□□□□□ -0.32
Usp6nlQ80XC3 AC136376.2-201ENSMUST00000228819 490 ntBASIC13.06□□□□□ -0.32
Usp6nlQ80XC3 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Usp6nlQ80XC3 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Usp6nlQ80XC3 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Usp6nlQ80XC3 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Usp6nlQ80XC3 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Usp6nlQ80XC3 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Usp6nlQ80XC3 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Usp6nlQ80XC3 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Usp6nlQ80XC3 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
Usp6nlQ80XC3 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Usp6nlQ80XC3 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Usp6nlQ80XC3 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
Usp6nlQ80XC3 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Usp6nlQ80XC3 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Usp6nlQ80XC3 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC13.05□□□□□ -0.32
Usp6nlQ80XC3 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Usp6nlQ80XC3 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Usp6nlQ80XC3 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Usp6nlQ80XC3 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC13.05□□□□□ -0.32
Usp6nlQ80XC3 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC13.05□□□□□ -0.32
Usp6nlQ80XC3 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Usp6nlQ80XC3 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Usp6nlQ80XC3 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Usp6nlQ80XC3 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Usp6nlQ80XC3 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Usp6nlQ80XC3 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Usp6nlQ80XC3 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Usp6nlQ80XC3 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Usp6nlQ80XC3 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Usp6nlQ80XC3 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Usp6nlQ80XC3 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC13.05□□□□□ -0.32
Usp6nlQ80XC3 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC13.05□□□□□ -0.32
Usp6nlQ80XC3 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Usp6nlQ80XC3 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC13.05□□□□□ -0.32
Usp6nlQ80XC3 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Usp6nlQ80XC3 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Usp6nlQ80XC3 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Usp6nlQ80XC3 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Usp6nlQ80XC3 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Usp6nlQ80XC3 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Usp6nlQ80XC3 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Usp6nlQ80XC3 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Usp6nlQ80XC3 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms