Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccdc116Q80X53 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ccdc116Q80X53 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC11.6□□□□□ -0.55
Ccdc116Q80X53 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ccdc116Q80X53 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ccdc116Q80X53 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ccdc116Q80X53 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccdc116Q80X53 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccdc116Q80X53 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Ccdc116Q80X53 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccdc116Q80X53 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccdc116Q80X53 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ccdc116Q80X53 4930589L23Rik-201ENSMUST00000091023 1364 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ccdc116Q80X53 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ccdc116Q80X53 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccdc116Q80X53 Gm15198-201ENSMUST00000117283 177 ntBASIC11.6□□□□□ -0.55
Ccdc116Q80X53 Gm15004-201ENSMUST00000119192 630 ntBASIC11.6□□□□□ -0.55
Ccdc116Q80X53 Gm4760-201ENSMUST00000119663 1030 ntBASIC11.6□□□□□ -0.55
Ccdc116Q80X53 Gm12201-201ENSMUST00000120657 1234 ntBASIC11.6□□□□□ -0.55
Ccdc116Q80X53 Gm15904-201ENSMUST00000154515 487 ntTSL 3 BASIC11.6□□□□□ -0.55
Ccdc116Q80X53 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ccdc116Q80X53 Gm6114-201ENSMUST00000182472 968 ntBASIC11.6□□□□□ -0.55
Ccdc116Q80X53 Gm28975-201ENSMUST00000186412 686 ntBASIC11.6□□□□□ -0.55
Ccdc116Q80X53 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC11.6□□□□□ -0.55
Ccdc116Q80X53 Ighv5-7-201ENSMUST00000192302 244 ntBASIC11.6□□□□□ -0.55
Ccdc116Q80X53 Gm7118-201ENSMUST00000200167 1003 ntBASIC11.6□□□□□ -0.55
Ccdc116Q80X53 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC11.6□□□□□ -0.55
Ccdc116Q80X53 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC11.6□□□□□ -0.55
Ccdc116Q80X53 Gm43962-201ENSMUST00000203898 190 ntBASIC11.6□□□□□ -0.55
Ccdc116Q80X53 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ccdc116Q80X53 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ccdc116Q80X53 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ccdc116Q80X53 Olfr1347-205ENSMUST00000220413 964 ntBASIC11.6□□□□□ -0.55
Ccdc116Q80X53 Gm7441-201ENSMUST00000220697 1074 ntBASIC11.6□□□□□ -0.55
Ccdc116Q80X53 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Ccdc116Q80X53 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccdc116Q80X53 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC11.6□□□□□ -0.55
Ccdc116Q80X53 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccdc116Q80X53 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Ccdc116Q80X53 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ccdc116Q80X53 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC11.6□□□□□ -0.55
Ccdc116Q80X53 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC11.6□□□□□ -0.55
Ccdc116Q80X53 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Ccdc116Q80X53 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Ccdc116Q80X53 AC173482.6-201ENSMUST00000225889 1741 ntBASIC11.6□□□□□ -0.55
Ccdc116Q80X53 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC11.6□□□□□ -0.55
Ccdc116Q80X53 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccdc116Q80X53 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccdc116Q80X53 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccdc116Q80X53 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccdc116Q80X53 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC11.6□□□□□ -0.55
Ccdc116Q80X53 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccdc116Q80X53 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccdc116Q80X53 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccdc116Q80X53 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccdc116Q80X53 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccdc116Q80X53 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC11.6□□□□□ -0.55
Ccdc116Q80X53 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ccdc116Q80X53 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC11.59□□□□□ -0.55
Ccdc116Q80X53 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC11.59□□□□□ -0.55
Ccdc116Q80X53 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccdc116Q80X53 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ccdc116Q80X53 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccdc116Q80X53 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccdc116Q80X53 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccdc116Q80X53 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Ccdc116Q80X53 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Ccdc116Q80X53 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccdc116Q80X53 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Ccdc116Q80X53 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ccdc116Q80X53 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccdc116Q80X53 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Ccdc116Q80X53 Gm42498-201ENSMUST00000199981 1372 ntBASIC11.59□□□□□ -0.55
Ccdc116Q80X53 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ccdc116Q80X53 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccdc116Q80X53 Sgcz-201ENSMUST00000118896 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccdc116Q80X53 Gm11511-201ENSMUST00000118146 540 ntBASIC11.59□□□□□ -0.55
Ccdc116Q80X53 Gm11960-201ENSMUST00000122068 925 ntBASIC11.59□□□□□ -0.55
Ccdc116Q80X53 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC11.59□□□□□ -0.55
Ccdc116Q80X53 Gm25700-201ENSMUST00000177693 110 ntBASIC11.59□□□□□ -0.55
Ccdc116Q80X53 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ccdc116Q80X53 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC11.59□□□□□ -0.55
Ccdc116Q80X53 Gm38317-201ENSMUST00000195564 343 ntBASIC11.59□□□□□ -0.55
Ccdc116Q80X53 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccdc116Q80X53 Gm8956-201ENSMUST00000203939 825 ntBASIC11.59□□□□□ -0.55
Ccdc116Q80X53 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC11.59□□□□□ -0.55
Ccdc116Q80X53 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ccdc116Q80X53 AC159205.5-202ENSMUST00000224849 386 ntBASIC11.59□□□□□ -0.55
Ccdc116Q80X53 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccdc116Q80X53 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccdc116Q80X53 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
Ccdc116Q80X53 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Ccdc116Q80X53 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccdc116Q80X53 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccdc116Q80X53 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccdc116Q80X53 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC11.59□□□□□ -0.55
Ccdc116Q80X53 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccdc116Q80X53 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccdc116Q80X53 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccdc116Q80X53 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms