Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Gm7405-201ENSMUST00000121476 1337 ntBASIC10.02□□□□□ -0.81
Rif1Q6PR54 Gpx6-201ENSMUST00000004453 1340 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Rif1Q6PR54 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Rif1Q6PR54 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC10.02□□□□□ -0.81
Rif1Q6PR54 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Rif1Q6PR54 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Rif1Q6PR54 Gm16441-201ENSMUST00000138176 924 ntBASIC10.02□□□□□ -0.81
Rif1Q6PR54 Gm15831-201ENSMUST00000156195 516 ntTSL 2 BASIC10.02□□□□□ -0.81
Rif1Q6PR54 Gm20483-201ENSMUST00000173162 851 ntTSL 2 BASIC10.02□□□□□ -0.81
Rif1Q6PR54 Map1lc3b-205ENSMUST00000181948 766 ntTSL 2 BASIC10.02□□□□□ -0.81
Rif1Q6PR54 Gm37981-201ENSMUST00000194280 535 ntBASIC10.02□□□□□ -0.81
Rif1Q6PR54 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC10.02□□□□□ -0.81
Rif1Q6PR54 Olfr1417-201ENSMUST00000061235 948 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Rif1Q6PR54 Try5-201ENSMUST00000064324 801 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Rif1Q6PR54 Olfr1535-201ENSMUST00000068163 981 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Rif1Q6PR54 Rps8-ps4-201ENSMUST00000092523 612 ntBASIC10.02□□□□□ -0.81
Rif1Q6PR54 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Rif1Q6PR54 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Rif1Q6PR54 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Rif1Q6PR54 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Rif1Q6PR54 Eif2c5-201ENSMUST00000125609 1416 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Rif1Q6PR54 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC10.02□□□□□ -0.81
Rif1Q6PR54 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Rif1Q6PR54 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Rif1Q6PR54 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Rif1Q6PR54 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Rif1Q6PR54 Gm9072-201ENSMUST00000218390 1514 ntBASIC10.02□□□□□ -0.81
Rif1Q6PR54 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Rif1Q6PR54 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Rif1Q6PR54 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Rif1Q6PR54 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Rif1Q6PR54 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC10.02□□□□□ -0.81
Rif1Q6PR54 Gm6158-201ENSMUST00000109467 904 ntBASIC10.02□□□□□ -0.81
Rif1Q6PR54 Tex33-202ENSMUST00000165170 1072 ntAPPRIS P4 TSL 1 (best) BASIC10.02□□□□□ -0.81
Rif1Q6PR54 Gm9578-201ENSMUST00000182354 753 ntBASIC10.02□□□□□ -0.81
Rif1Q6PR54 Gm27211-201ENSMUST00000183507 631 ntTSL 5 BASIC10.02□□□□□ -0.81
Rif1Q6PR54 Gm9771-201ENSMUST00000198267 1137 ntBASIC10.02□□□□□ -0.81
Rif1Q6PR54 AC170597.1-201ENSMUST00000221956 440 ntTSL 2 BASIC10.02□□□□□ -0.81
Rif1Q6PR54 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Rif1Q6PR54 Tex33-201ENSMUST00000074380 1147 ntAPPRIS P4 TSL 1 (best) BASIC10.02□□□□□ -0.81
Rif1Q6PR54 Fcer1g-201ENSMUST00000079957 674 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Rif1Q6PR54 Gm10263-201ENSMUST00000085163 300 ntBASIC10.02□□□□□ -0.81
Rif1Q6PR54 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC10.02□□□□□ -0.81
Rif1Q6PR54 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Rif1Q6PR54 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Rif1Q6PR54 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Rif1Q6PR54 Nudt18-202ENSMUST00000228554 3619 ntBASIC10.02□□□□□ -0.81
Rif1Q6PR54 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Rif1Q6PR54 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Rif1Q6PR54 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Rif1Q6PR54 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
Rif1Q6PR54 AC154354.1-203ENSMUST00000225565 1364 ntBASIC10.01□□□□□ -0.81
Rif1Q6PR54 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Rif1Q6PR54 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Rif1Q6PR54 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Rif1Q6PR54 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Rif1Q6PR54 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC10.01□□□□□ -0.81
Rif1Q6PR54 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Rif1Q6PR54 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Rif1Q6PR54 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Rif1Q6PR54 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Rif1Q6PR54 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Rif1Q6PR54 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Rif1Q6PR54 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Rif1Q6PR54 Snd1-206ENSMUST00000167201 3781 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Rif1Q6PR54 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Rif1Q6PR54 Fam107b-202ENSMUST00000115052 861 ntTSL 3 BASIC10.01□□□□□ -0.81
Rif1Q6PR54 Gm15519-201ENSMUST00000120088 1566 ntBASIC10.01□□□□□ -0.81
Rif1Q6PR54 Gm14699-201ENSMUST00000122340 228 ntBASIC10.01□□□□□ -0.81
Rif1Q6PR54 2810403D21Rik-204ENSMUST00000144421 747 ntTSL 3 BASIC10.01□□□□□ -0.81
Rif1Q6PR54 Mir1941-201ENSMUST00000157834 83 ntBASIC10.01□□□□□ -0.81
Rif1Q6PR54 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC10.01□□□□□ -0.81
Rif1Q6PR54 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Rif1Q6PR54 1700019D03Rik-205ENSMUST00000190726 702 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Rif1Q6PR54 CAAA01125382.3-201ENSMUST00000215277 643 ntBASIC10.01□□□□□ -0.81
Rif1Q6PR54 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Rif1Q6PR54 Ngp-201ENSMUST00000035061 1222 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Rif1Q6PR54 Mir339-201ENSMUST00000083659 96 ntBASIC10.01□□□□□ -0.81
Rif1Q6PR54 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Rif1Q6PR54 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Rif1Q6PR54 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Rif1Q6PR54 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Rif1Q6PR54 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC10.01□□□□□ -0.81
Rif1Q6PR54 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Rif1Q6PR54 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Rif1Q6PR54 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Rif1Q6PR54 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC10.01□□□□□ -0.81
Rif1Q6PR54 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Rif1Q6PR54 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Rif1Q6PR54 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Rif1Q6PR54 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Rif1Q6PR54 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Rif1Q6PR54 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Rif1Q6PR54 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Rif1Q6PR54 Trappc1-202ENSMUST00000102601 759 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Rif1Q6PR54 Gm5863-201ENSMUST00000121760 1008 ntBASIC10.01□□□□□ -0.81
Rif1Q6PR54 Gm14152-201ENSMUST00000127020 1073 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Rif1Q6PR54 Gm5976-201ENSMUST00000180794 996 ntBASIC10.01□□□□□ -0.81
Rif1Q6PR54 Gm17514-201ENSMUST00000181863 1102 ntTSL 5 BASIC10.01□□□□□ -0.81
Rif1Q6PR54 Rian-208ENSMUST00000182370 352 ntTSL 3 BASIC10.01□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms