Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Gm44106-201ENSMUST00000203153 1599 ntBASIC13.7□□□□□ -0.22
Nup98Q6PFD9 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nup98Q6PFD9 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nup98Q6PFD9 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nup98Q6PFD9 Gm5822-201ENSMUST00000161562 1378 ntBASIC13.69□□□□□ -0.22
Nup98Q6PFD9 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC13.69□□□□□ -0.22
Nup98Q6PFD9 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Nup98Q6PFD9 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nup98Q6PFD9 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nup98Q6PFD9 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
Nup98Q6PFD9 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nup98Q6PFD9 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC13.69□□□□□ -0.22
Nup98Q6PFD9 Gm12274-201ENSMUST00000120062 385 ntBASIC13.69□□□□□ -0.22
Nup98Q6PFD9 Gm16030-201ENSMUST00000159098 603 ntBASIC13.69□□□□□ -0.22
Nup98Q6PFD9 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC13.69□□□□□ -0.22
Nup98Q6PFD9 Gm8723-201ENSMUST00000166076 820 ntBASIC13.69□□□□□ -0.22
Nup98Q6PFD9 Gm8701-201ENSMUST00000169259 874 ntBASIC13.69□□□□□ -0.22
Nup98Q6PFD9 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC13.69□□□□□ -0.22
Nup98Q6PFD9 Gm9369-201ENSMUST00000196009 733 ntBASIC13.69□□□□□ -0.22
Nup98Q6PFD9 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nup98Q6PFD9 AC154184.3-201ENSMUST00000225620 1090 ntBASIC13.69□□□□□ -0.22
Nup98Q6PFD9 Gm8325-201ENSMUST00000099086 453 ntBASIC13.69□□□□□ -0.22
Nup98Q6PFD9 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nup98Q6PFD9 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nup98Q6PFD9 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nup98Q6PFD9 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Nup98Q6PFD9 Gm6024-201ENSMUST00000117850 1558 ntBASIC13.69□□□□□ -0.22
Nup98Q6PFD9 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nup98Q6PFD9 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nup98Q6PFD9 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nup98Q6PFD9 Gm6157-201ENSMUST00000199935 1897 ntBASIC13.69□□□□□ -0.22
Nup98Q6PFD9 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Nup98Q6PFD9 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nup98Q6PFD9 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nup98Q6PFD9 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nup98Q6PFD9 Gm13135-201ENSMUST00000117628 3121 ntBASIC13.69□□□□□ -0.22
Nup98Q6PFD9 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nup98Q6PFD9 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
Nup98Q6PFD9 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nup98Q6PFD9 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nup98Q6PFD9 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nup98Q6PFD9 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nup98Q6PFD9 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nup98Q6PFD9 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nup98Q6PFD9 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC13.69□□□□□ -0.22
Nup98Q6PFD9 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC13.69□□□□□ -0.22
Nup98Q6PFD9 Gm25562-201ENSMUST00000104608 133 ntBASIC13.69□□□□□ -0.22
Nup98Q6PFD9 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC13.69□□□□□ -0.22
Nup98Q6PFD9 Mrip-ps-201ENSMUST00000184613 940 ntBASIC13.69□□□□□ -0.22
Nup98Q6PFD9 Gm28833-201ENSMUST00000189671 559 ntBASIC13.69□□□□□ -0.22
Nup98Q6PFD9 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC13.69□□□□□ -0.22
Nup98Q6PFD9 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC13.69□□□□□ -0.22
Nup98Q6PFD9 AC122035.1-201ENSMUST00000227576 1016 ntBASIC13.69□□□□□ -0.22
Nup98Q6PFD9 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nup98Q6PFD9 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Nup98Q6PFD9 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nup98Q6PFD9 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nup98Q6PFD9 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nup98Q6PFD9 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nup98Q6PFD9 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nup98Q6PFD9 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC13.68□□□□□ -0.22
Nup98Q6PFD9 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nup98Q6PFD9 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nup98Q6PFD9 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
Nup98Q6PFD9 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.68□□□□□ -0.22
Nup98Q6PFD9 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nup98Q6PFD9 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nup98Q6PFD9 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nup98Q6PFD9 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nup98Q6PFD9 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Nup98Q6PFD9 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Nup98Q6PFD9 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC13.68□□□□□ -0.22
Nup98Q6PFD9 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nup98Q6PFD9 Gm13284-201ENSMUST00000121020 547 ntBASIC13.68□□□□□ -0.22
Nup98Q6PFD9 Ins2-208ENSMUST00000162317 297 ntTSL 5 BASIC13.68□□□□□ -0.22
Nup98Q6PFD9 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC13.68□□□□□ -0.22
Nup98Q6PFD9 Mir483-201ENSMUST00000093631 73 ntBASIC13.68□□□□□ -0.22
Nup98Q6PFD9 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC13.68□□□□□ -0.22
Nup98Q6PFD9 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nup98Q6PFD9 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nup98Q6PFD9 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nup98Q6PFD9 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nup98Q6PFD9 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nup98Q6PFD9 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC13.68□□□□□ -0.22
Nup98Q6PFD9 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nup98Q6PFD9 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Nup98Q6PFD9 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nup98Q6PFD9 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Nup98Q6PFD9 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nup98Q6PFD9 Gm44755-201ENSMUST00000207830 2102 ntBASIC13.67□□□□□ -0.22
Nup98Q6PFD9 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Nup98Q6PFD9 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nup98Q6PFD9 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nup98Q6PFD9 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nup98Q6PFD9 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Nup98Q6PFD9 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC13.67□□□□□ -0.22
Nup98Q6PFD9 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nup98Q6PFD9 Srpk1-202ENSMUST00000114767 445 ntTSL 3 BASIC13.67□□□□□ -0.22
Nup98Q6PFD9 Gm14213-201ENSMUST00000119778 768 ntBASIC13.67□□□□□ -0.22
Nup98Q6PFD9 Gm15197-201ENSMUST00000120526 478 ntBASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 143.4 ms