Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smarcd3Q6P9Z1 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Smarcd3Q6P9Z1 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Smarcd3Q6P9Z1 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smarcd3Q6P9Z1 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Smarcd3Q6P9Z1 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC10.84□□□□□ -0.67
Smarcd3Q6P9Z1 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smarcd3Q6P9Z1 Gm43773-201ENSMUST00000198548 2162 ntBASIC10.84□□□□□ -0.67
Smarcd3Q6P9Z1 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC10.84□□□□□ -0.67
Smarcd3Q6P9Z1 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smarcd3Q6P9Z1 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC10.84□□□□□ -0.67
Smarcd3Q6P9Z1 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smarcd3Q6P9Z1 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smarcd3Q6P9Z1 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smarcd3Q6P9Z1 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smarcd3Q6P9Z1 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
Smarcd3Q6P9Z1 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.67
Smarcd3Q6P9Z1 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC10.83□□□□□ -0.67
Smarcd3Q6P9Z1 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smarcd3Q6P9Z1 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smarcd3Q6P9Z1 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smarcd3Q6P9Z1 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Smarcd3Q6P9Z1 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Smarcd3Q6P9Z1 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smarcd3Q6P9Z1 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Smarcd3Q6P9Z1 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC10.83□□□□□ -0.68
Smarcd3Q6P9Z1 AC124397.2-201ENSMUST00000225575 2215 ntBASIC10.83□□□□□ -0.68
Smarcd3Q6P9Z1 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smarcd3Q6P9Z1 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC10.83□□□□□ -0.68
Smarcd3Q6P9Z1 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Smarcd3Q6P9Z1 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Smarcd3Q6P9Z1 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC10.83□□□□□ -0.68
Smarcd3Q6P9Z1 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC10.83□□□□□ -0.68
Smarcd3Q6P9Z1 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC10.83□□□□□ -0.68
Smarcd3Q6P9Z1 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Smarcd3Q6P9Z1 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC10.83□□□□□ -0.68
Smarcd3Q6P9Z1 Gm5850-201ENSMUST00000192923 1206 ntBASIC10.83□□□□□ -0.68
Smarcd3Q6P9Z1 Gm38158-201ENSMUST00000194617 339 ntBASIC10.83□□□□□ -0.68
Smarcd3Q6P9Z1 Gm19994-201ENSMUST00000217086 586 ntBASIC10.83□□□□□ -0.68
Smarcd3Q6P9Z1 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC10.83□□□□□ -0.68
Smarcd3Q6P9Z1 AC140451.2-201ENSMUST00000228030 664 ntBASIC10.83□□□□□ -0.68
Smarcd3Q6P9Z1 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smarcd3Q6P9Z1 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smarcd3Q6P9Z1 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smarcd3Q6P9Z1 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smarcd3Q6P9Z1 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Smarcd3Q6P9Z1 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smarcd3Q6P9Z1 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Smarcd3Q6P9Z1 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Smarcd3Q6P9Z1 AC126257.1-201ENSMUST00000213195 1536 ntBASIC10.83□□□□□ -0.68
Smarcd3Q6P9Z1 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Smarcd3Q6P9Z1 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Smarcd3Q6P9Z1 Gm45677-201ENSMUST00000209975 1341 ntBASIC10.83□□□□□ -0.68
Smarcd3Q6P9Z1 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC10.83□□□□□ -0.68
Smarcd3Q6P9Z1 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smarcd3Q6P9Z1 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smarcd3Q6P9Z1 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Smarcd3Q6P9Z1 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Smarcd3Q6P9Z1 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smarcd3Q6P9Z1 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Smarcd3Q6P9Z1 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smarcd3Q6P9Z1 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smarcd3Q6P9Z1 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smarcd3Q6P9Z1 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smarcd3Q6P9Z1 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smarcd3Q6P9Z1 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Smarcd3Q6P9Z1 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC10.82□□□□□ -0.68
Smarcd3Q6P9Z1 Gm23931-201ENSMUST00000103842 109 ntBASIC10.82□□□□□ -0.68
Smarcd3Q6P9Z1 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC10.82□□□□□ -0.68
Smarcd3Q6P9Z1 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smarcd3Q6P9Z1 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC10.82□□□□□ -0.68
Smarcd3Q6P9Z1 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC10.82□□□□□ -0.68
Smarcd3Q6P9Z1 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smarcd3Q6P9Z1 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
Smarcd3Q6P9Z1 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Smarcd3Q6P9Z1 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC10.82□□□□□ -0.68
Smarcd3Q6P9Z1 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC10.82□□□□□ -0.68
Smarcd3Q6P9Z1 Gm5950-201ENSMUST00000213337 772 ntBASIC10.82□□□□□ -0.68
Smarcd3Q6P9Z1 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC10.82□□□□□ -0.68
Smarcd3Q6P9Z1 AC133598.1-201ENSMUST00000224327 660 ntBASIC10.82□□□□□ -0.68
Smarcd3Q6P9Z1 AC163667.3-201ENSMUST00000225774 222 ntBASIC10.82□□□□□ -0.68
Smarcd3Q6P9Z1 AC140406.1-201ENSMUST00000226481 465 ntBASIC10.82□□□□□ -0.68
Smarcd3Q6P9Z1 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smarcd3Q6P9Z1 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smarcd3Q6P9Z1 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smarcd3Q6P9Z1 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smarcd3Q6P9Z1 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC10.82□□□□□ -0.68
Smarcd3Q6P9Z1 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smarcd3Q6P9Z1 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Smarcd3Q6P9Z1 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smarcd3Q6P9Z1 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smarcd3Q6P9Z1 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Smarcd3Q6P9Z1 Gm45053-201ENSMUST00000206112 2499 ntBASIC10.82□□□□□ -0.68
Smarcd3Q6P9Z1 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC10.82□□□□□ -0.68
Smarcd3Q6P9Z1 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Smarcd3Q6P9Z1 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Smarcd3Q6P9Z1 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Smarcd3Q6P9Z1 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC10.82□□□□□ -0.68
Smarcd3Q6P9Z1 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Smarcd3Q6P9Z1 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms