Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Foxc1Q61572 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC9.06□□□□□ -0.96
Foxc1Q61572 Gm5638-201ENSMUST00000118618 1258 ntBASIC9.06□□□□□ -0.96
Foxc1Q61572 Gm15808-201ENSMUST00000119046 604 ntBASIC9.06□□□□□ -0.96
Foxc1Q61572 Gm4986-201ENSMUST00000119731 549 ntBASIC9.06□□□□□ -0.96
Foxc1Q61572 Gm16726-201ENSMUST00000130184 892 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Foxc1Q61572 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Foxc1Q61572 Gm16570-201ENSMUST00000161951 436 ntBASIC9.06□□□□□ -0.96
Foxc1Q61572 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC9.06□□□□□ -0.96
Foxc1Q61572 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC9.06□□□□□ -0.96
Foxc1Q61572 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC9.06□□□□□ -0.96
Foxc1Q61572 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
Foxc1Q61572 Mir669a-7-201ENSMUST00000180364 87 ntBASIC9.06□□□□□ -0.96
Foxc1Q61572 Gm29640-201ENSMUST00000187972 278 ntBASIC9.06□□□□□ -0.96
Foxc1Q61572 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
Foxc1Q61572 Gm38241-201ENSMUST00000192641 898 ntBASIC9.06□□□□□ -0.96
Foxc1Q61572 Gm8869-201ENSMUST00000195222 947 ntBASIC9.06□□□□□ -0.96
Foxc1Q61572 Mir669a-6-201ENSMUST00000196127 87 ntBASIC9.06□□□□□ -0.96
Foxc1Q61572 9430087B13Rik-201ENSMUST00000196548 1085 ntBASIC9.06□□□□□ -0.96
Foxc1Q61572 Mir669a-12-201ENSMUST00000197274 87 ntBASIC9.06□□□□□ -0.96
Foxc1Q61572 Mir669a-5-201ENSMUST00000197439 87 ntBASIC9.06□□□□□ -0.96
Foxc1Q61572 Mir669a-10-201ENSMUST00000197745 87 ntBASIC9.06□□□□□ -0.96
Foxc1Q61572 Mir669a-11-201ENSMUST00000197952 87 ntBASIC9.06□□□□□ -0.96
Foxc1Q61572 Gm43192-201ENSMUST00000198002 637 ntTSL 3 BASIC9.06□□□□□ -0.96
Foxc1Q61572 Mir669a-4-201ENSMUST00000198665 87 ntBASIC9.06□□□□□ -0.96
Foxc1Q61572 Mir669a-9-201ENSMUST00000200087 87 ntBASIC9.06□□□□□ -0.96
Foxc1Q61572 Gm7118-201ENSMUST00000200167 1003 ntBASIC9.06□□□□□ -0.96
Foxc1Q61572 Mir669a-8-201ENSMUST00000200268 87 ntBASIC9.06□□□□□ -0.96
Foxc1Q61572 Gm42556-201ENSMUST00000201397 607 ntTSL 3 BASIC9.06□□□□□ -0.96
Foxc1Q61572 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC9.06□□□□□ -0.96
Foxc1Q61572 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Foxc1Q61572 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC9.06□□□□□ -0.96
Foxc1Q61572 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC9.06□□□□□ -0.96
Foxc1Q61572 AC122305.3-201ENSMUST00000214762 361 ntTSL 3 BASIC9.06□□□□□ -0.96
Foxc1Q61572 Gm18996-201ENSMUST00000214851 755 ntBASIC9.06□□□□□ -0.96
Foxc1Q61572 AC120394.1-201ENSMUST00000217153 351 ntBASIC9.06□□□□□ -0.96
Foxc1Q61572 CT573034.1-201ENSMUST00000222983 313 ntBASIC9.06□□□□□ -0.96
Foxc1Q61572 E130119H09Rik-201ENSMUST00000223176 978 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Foxc1Q61572 Klra7-202ENSMUST00000049304 1075 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
Foxc1Q61572 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
Foxc1Q61572 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
Foxc1Q61572 Defb10-201ENSMUST00000054162 298 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Foxc1Q61572 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Foxc1Q61572 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
Foxc1Q61572 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Foxc1Q61572 Olfr884-201ENSMUST00000077732 930 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
Foxc1Q61572 Vmn1r223-201ENSMUST00000091719 1086 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
Foxc1Q61572 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Foxc1Q61572 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Foxc1Q61572 Gm7993-201ENSMUST00000200970 1384 ntBASIC9.06□□□□□ -0.96
Foxc1Q61572 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
Foxc1Q61572 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Foxc1Q61572 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Foxc1Q61572 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Foxc1Q61572 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Foxc1Q61572 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC9.06□□□□□ -0.96
Foxc1Q61572 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC9.06□□□□□ -0.96
Foxc1Q61572 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Foxc1Q61572 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Foxc1Q61572 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Foxc1Q61572 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
Foxc1Q61572 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Foxc1Q61572 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Foxc1Q61572 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Foxc1Q61572 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Foxc1Q61572 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
Foxc1Q61572 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Foxc1Q61572 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Foxc1Q61572 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Foxc1Q61572 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Foxc1Q61572 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Foxc1Q61572 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC9.05□□□□□ -0.96
Foxc1Q61572 Arhgap6-202ENSMUST00000087016 1310 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Foxc1Q61572 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC9.05□□□□□ -0.96
Foxc1Q61572 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Foxc1Q61572 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC9.05□□□□□ -0.96
Foxc1Q61572 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Foxc1Q61572 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Foxc1Q61572 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC9.05□□□□□ -0.96
Foxc1Q61572 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Foxc1Q61572 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Foxc1Q61572 AC124577.2-201ENSMUST00000217413 2420 ntBASIC9.05□□□□□ -0.96
Foxc1Q61572 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC9.05□□□□□ -0.96
Foxc1Q61572 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Foxc1Q61572 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Foxc1Q61572 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Foxc1Q61572 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Foxc1Q61572 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Foxc1Q61572 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Foxc1Q61572 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC9.05□□□□□ -0.96
Foxc1Q61572 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC9.05□□□□□ -0.96
Foxc1Q61572 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Foxc1Q61572 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
Foxc1Q61572 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
Foxc1Q61572 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Foxc1Q61572 Mir124-2hg-204ENSMUST00000188983 1365 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Foxc1Q61572 Gm21064-201ENSMUST00000189723 1375 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Foxc1Q61572 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Foxc1Q61572 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Foxc1Q61572 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC9.05□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms