Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Gm10288-201ENSMUST00000084614 537 ntBASIC11.91□□□□□ -0.5
Six4Q61321 Gm5537-201ENSMUST00000091117 1252 ntBASIC11.91□□□□□ -0.5
Six4Q61321 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Six4Q61321 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Six4Q61321 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Six4Q61321 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Six4Q61321 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Six4Q61321 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Six4Q61321 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Six4Q61321 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Six4Q61321 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Six4Q61321 AC124397.2-201ENSMUST00000225575 2215 ntBASIC11.91□□□□□ -0.5
Six4Q61321 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Six4Q61321 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Six4Q61321 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Six4Q61321 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Six4Q61321 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Six4Q61321 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Six4Q61321 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Six4Q61321 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Six4Q61321 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Six4Q61321 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Six4Q61321 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Six4Q61321 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Six4Q61321 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Six4Q61321 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Six4Q61321 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Six4Q61321 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Six4Q61321 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC11.9□□□□□ -0.5
Six4Q61321 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Six4Q61321 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Six4Q61321 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Six4Q61321 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Six4Q61321 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Six4Q61321 Gm7851-201ENSMUST00000117574 323 ntBASIC11.9□□□□□ -0.5
Six4Q61321 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC11.9□□□□□ -0.5
Six4Q61321 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC11.9□□□□□ -0.5
Six4Q61321 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC11.9□□□□□ -0.5
Six4Q61321 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Six4Q61321 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC11.9□□□□□ -0.5
Six4Q61321 Gm5982-201ENSMUST00000196234 512 ntBASIC11.9□□□□□ -0.5
Six4Q61321 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Six4Q61321 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Six4Q61321 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Six4Q61321 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Six4Q61321 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC11.9□□□□□ -0.5
Six4Q61321 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC11.9□□□□□ -0.5
Six4Q61321 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Six4Q61321 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Six4Q61321 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Six4Q61321 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Six4Q61321 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Six4Q61321 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Six4Q61321 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Six4Q61321 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Six4Q61321 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Six4Q61321 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC11.9□□□□□ -0.5
Six4Q61321 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Six4Q61321 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Six4Q61321 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Six4Q61321 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Six4Q61321 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Six4Q61321 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Six4Q61321 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Six4Q61321 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Six4Q61321 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Six4Q61321 AC154639.1-201ENSMUST00000224393 2849 ntBASIC11.9□□□□□ -0.5
Six4Q61321 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Six4Q61321 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Six4Q61321 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Six4Q61321 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Six4Q61321 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Six4Q61321 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Six4Q61321 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC11.89□□□□□ -0.51
Six4Q61321 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Six4Q61321 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Six4Q61321 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Six4Q61321 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Six4Q61321 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Six4Q61321 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Six4Q61321 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Six4Q61321 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Six4Q61321 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Six4Q61321 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Six4Q61321 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC11.89□□□□□ -0.51
Six4Q61321 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Six4Q61321 Gm12579-201ENSMUST00000118040 783 ntBASIC11.89□□□□□ -0.51
Six4Q61321 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Six4Q61321 Gm8815-201ENSMUST00000173809 620 ntBASIC11.89□□□□□ -0.51
Six4Q61321 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Six4Q61321 Gm37466-201ENSMUST00000195692 652 ntBASIC11.89□□□□□ -0.51
Six4Q61321 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC11.89□□□□□ -0.51
Six4Q61321 AC134869.4-202ENSMUST00000224350 837 ntBASIC11.89□□□□□ -0.51
Six4Q61321 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Six4Q61321 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Six4Q61321 Gm9785-201ENSMUST00000062642 1006 ntBASIC11.89□□□□□ -0.51
Six4Q61321 AC126257.2-201ENSMUST00000215507 2300 ntBASIC11.89□□□□□ -0.51
Six4Q61321 Gm37542-201ENSMUST00000192563 2832 ntBASIC11.89□□□□□ -0.51
Six4Q61321 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Six4Q61321 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms