Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC14.16□□□□□ -0.14
Vps54Q5SPW0 Gm10774-201ENSMUST00000188689 204 ntBASIC14.16□□□□□ -0.14
Vps54Q5SPW0 Gm34767-201ENSMUST00000191813 1062 ntBASIC14.16□□□□□ -0.14
Vps54Q5SPW0 Gm5982-201ENSMUST00000196234 512 ntBASIC14.16□□□□□ -0.14
Vps54Q5SPW0 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Vps54Q5SPW0 Gm3786-201ENSMUST00000202659 378 ntBASIC14.16□□□□□ -0.14
Vps54Q5SPW0 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps54Q5SPW0 AC159819.2-201ENSMUST00000216151 342 ntBASIC14.16□□□□□ -0.14
Vps54Q5SPW0 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC14.16□□□□□ -0.14
Vps54Q5SPW0 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps54Q5SPW0 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Vps54Q5SPW0 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps54Q5SPW0 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps54Q5SPW0 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps54Q5SPW0 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps54Q5SPW0 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps54Q5SPW0 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Vps54Q5SPW0 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Vps54Q5SPW0 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps54Q5SPW0 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps54Q5SPW0 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC14.16□□□□□ -0.14
Vps54Q5SPW0 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC14.16□□□□□ -0.14
Vps54Q5SPW0 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC14.16□□□□□ -0.14
Vps54Q5SPW0 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vps54Q5SPW0 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Vps54Q5SPW0 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vps54Q5SPW0 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vps54Q5SPW0 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vps54Q5SPW0 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vps54Q5SPW0 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vps54Q5SPW0 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC14.15□□□□□ -0.14
Vps54Q5SPW0 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vps54Q5SPW0 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Vps54Q5SPW0 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Vps54Q5SPW0 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Vps54Q5SPW0 Gm15432-201ENSMUST00000121106 195 ntBASIC14.15□□□□□ -0.14
Vps54Q5SPW0 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vps54Q5SPW0 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Vps54Q5SPW0 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Vps54Q5SPW0 Mir6546-201ENSMUST00000184460 62 ntBASIC14.15□□□□□ -0.14
Vps54Q5SPW0 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC14.15□□□□□ -0.14
Vps54Q5SPW0 Mir7686-201ENSMUST00000200604 57 ntBASIC14.15□□□□□ -0.14
Vps54Q5SPW0 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC14.15□□□□□ -0.14
Vps54Q5SPW0 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Vps54Q5SPW0 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC14.15□□□□□ -0.14
Vps54Q5SPW0 AC134869.4-202ENSMUST00000224350 837 ntBASIC14.15□□□□□ -0.14
Vps54Q5SPW0 AC134860.1-201ENSMUST00000224867 660 ntBASIC14.15□□□□□ -0.14
Vps54Q5SPW0 Gm42943-201ENSMUST00000199676 3242 ntBASIC14.15□□□□□ -0.14
Vps54Q5SPW0 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vps54Q5SPW0 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Vps54Q5SPW0 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vps54Q5SPW0 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vps54Q5SPW0 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vps54Q5SPW0 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vps54Q5SPW0 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vps54Q5SPW0 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vps54Q5SPW0 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vps54Q5SPW0 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vps54Q5SPW0 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vps54Q5SPW0 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Vps54Q5SPW0 Gm21998-201ENSMUST00000117552 1308 ntBASIC14.15□□□□□ -0.15
Vps54Q5SPW0 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Vps54Q5SPW0 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vps54Q5SPW0 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vps54Q5SPW0 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vps54Q5SPW0 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Vps54Q5SPW0 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Vps54Q5SPW0 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vps54Q5SPW0 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vps54Q5SPW0 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vps54Q5SPW0 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vps54Q5SPW0 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Vps54Q5SPW0 Gm43760-201ENSMUST00000202120 3015 ntBASIC14.14□□□□□ -0.15
Vps54Q5SPW0 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vps54Q5SPW0 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vps54Q5SPW0 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Vps54Q5SPW0 Gm9540-201ENSMUST00000188230 478 ntBASIC14.14□□□□□ -0.15
Vps54Q5SPW0 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Vps54Q5SPW0 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC14.14□□□□□ -0.15
Vps54Q5SPW0 Gm38314-201ENSMUST00000195709 625 ntBASIC14.14□□□□□ -0.15
Vps54Q5SPW0 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC14.14□□□□□ -0.15
Vps54Q5SPW0 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC14.14□□□□□ -0.15
Vps54Q5SPW0 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC14.14□□□□□ -0.15
Vps54Q5SPW0 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Vps54Q5SPW0 AC112945.1-201ENSMUST00000226413 514 ntBASIC14.14□□□□□ -0.15
Vps54Q5SPW0 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vps54Q5SPW0 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Vps54Q5SPW0 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Vps54Q5SPW0 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vps54Q5SPW0 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Vps54Q5SPW0 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vps54Q5SPW0 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vps54Q5SPW0 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vps54Q5SPW0 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Vps54Q5SPW0 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vps54Q5SPW0 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vps54Q5SPW0 Gm1840-201ENSMUST00000051687 1432 ntBASIC14.14□□□□□ -0.15
Vps54Q5SPW0 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vps54Q5SPW0 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vps54Q5SPW0 Gm19817-201ENSMUST00000199764 2132 ntBASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms