Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC13.49□□□□□ -0.25
Ccdc88aQ5SNZ0 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc88aQ5SNZ0 Actg1-201ENSMUST00000062147 876 ntTSL 3 BASIC13.49□□□□□ -0.25
Ccdc88aQ5SNZ0 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc88aQ5SNZ0 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc88aQ5SNZ0 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc88aQ5SNZ0 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc88aQ5SNZ0 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc88aQ5SNZ0 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc88aQ5SNZ0 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Ccdc88aQ5SNZ0 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc88aQ5SNZ0 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc88aQ5SNZ0 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc88aQ5SNZ0 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc88aQ5SNZ0 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc88aQ5SNZ0 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC13.49□□□□□ -0.25
Ccdc88aQ5SNZ0 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc88aQ5SNZ0 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Ccdc88aQ5SNZ0 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc88aQ5SNZ0 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc88aQ5SNZ0 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc88aQ5SNZ0 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
Ccdc88aQ5SNZ0 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc88aQ5SNZ0 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc88aQ5SNZ0 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc88aQ5SNZ0 Gm25063-201ENSMUST00000104666 94 ntBASIC13.48□□□□□ -0.25
Ccdc88aQ5SNZ0 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc88aQ5SNZ0 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc88aQ5SNZ0 Gm15524-201ENSMUST00000159874 463 ntTSL 3 BASIC13.48□□□□□ -0.25
Ccdc88aQ5SNZ0 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc88aQ5SNZ0 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc88aQ5SNZ0 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC13.48□□□□□ -0.25
Ccdc88aQ5SNZ0 Gm5982-201ENSMUST00000196234 512 ntBASIC13.48□□□□□ -0.25
Ccdc88aQ5SNZ0 Gm3726-201ENSMUST00000203110 785 ntBASIC13.48□□□□□ -0.25
Ccdc88aQ5SNZ0 Gm8574-201ENSMUST00000203207 924 ntBASIC13.48□□□□□ -0.25
Ccdc88aQ5SNZ0 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Ccdc88aQ5SNZ0 Gm6108-201ENSMUST00000208365 367 ntBASIC13.48□□□□□ -0.25
Ccdc88aQ5SNZ0 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC13.48□□□□□ -0.25
Ccdc88aQ5SNZ0 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Ccdc88aQ5SNZ0 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc88aQ5SNZ0 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc88aQ5SNZ0 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Ccdc88aQ5SNZ0 Gm45428-201ENSMUST00000209619 1789 ntBASIC13.48□□□□□ -0.25
Ccdc88aQ5SNZ0 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc88aQ5SNZ0 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc88aQ5SNZ0 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc88aQ5SNZ0 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC13.48□□□□□ -0.25
Ccdc88aQ5SNZ0 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Ccdc88aQ5SNZ0 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Ccdc88aQ5SNZ0 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc88aQ5SNZ0 Gm11783-201ENSMUST00000119549 885 ntBASIC13.48□□□□□ -0.25
Ccdc88aQ5SNZ0 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC13.48□□□□□ -0.25
Ccdc88aQ5SNZ0 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc88aQ5SNZ0 1700086D15Rik-201ENSMUST00000020855 1092 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Ccdc88aQ5SNZ0 Gm45500-201ENSMUST00000211676 803 ntBASIC13.48□□□□□ -0.25
Ccdc88aQ5SNZ0 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Ccdc88aQ5SNZ0 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc88aQ5SNZ0 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC13.48□□□□□ -0.25
Ccdc88aQ5SNZ0 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc88aQ5SNZ0 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC13.48□□□□□ -0.25
Ccdc88aQ5SNZ0 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc88aQ5SNZ0 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc88aQ5SNZ0 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
Ccdc88aQ5SNZ0 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Ccdc88aQ5SNZ0 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc88aQ5SNZ0 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc88aQ5SNZ0 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Ccdc88aQ5SNZ0 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Ccdc88aQ5SNZ0 Gm13722-201ENSMUST00000117964 3066 ntBASIC13.47□□□□□ -0.25
Ccdc88aQ5SNZ0 Gm42913-201ENSMUST00000197936 1853 ntBASIC13.47□□□□□ -0.25
Ccdc88aQ5SNZ0 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc88aQ5SNZ0 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc88aQ5SNZ0 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Ccdc88aQ5SNZ0 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc88aQ5SNZ0 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc88aQ5SNZ0 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Ccdc88aQ5SNZ0 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC13.47□□□□□ -0.25
Ccdc88aQ5SNZ0 Gm29100-201ENSMUST00000187564 4410 ntBASIC13.47□□□□□ -0.25
Ccdc88aQ5SNZ0 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc88aQ5SNZ0 Gm43242-201ENSMUST00000199507 1776 ntBASIC13.47□□□□□ -0.25
Ccdc88aQ5SNZ0 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc88aQ5SNZ0 Gm14942-201ENSMUST00000119642 336 ntBASIC13.47□□□□□ -0.25
Ccdc88aQ5SNZ0 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC13.47□□□□□ -0.25
Ccdc88aQ5SNZ0 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC13.47□□□□□ -0.25
Ccdc88aQ5SNZ0 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc88aQ5SNZ0 Gm18499-201ENSMUST00000220808 1021 ntBASIC13.47□□□□□ -0.25
Ccdc88aQ5SNZ0 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC13.47□□□□□ -0.25
Ccdc88aQ5SNZ0 Gm5451-201ENSMUST00000080545 579 ntBASIC13.47□□□□□ -0.25
Ccdc88aQ5SNZ0 AC108858.2-201ENSMUST00000228186 1425 ntBASIC13.47□□□□□ -0.25
Ccdc88aQ5SNZ0 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Ccdc88aQ5SNZ0 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc88aQ5SNZ0 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc88aQ5SNZ0 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc88aQ5SNZ0 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc88aQ5SNZ0 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc88aQ5SNZ0 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc88aQ5SNZ0 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc88aQ5SNZ0 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc88aQ5SNZ0 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc88aQ5SNZ0 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms