Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC8.87□□□□□ -0.99
Trav3-3Q5R1C3 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC8.87□□□□□ -0.99
Trav3-3Q5R1C3 Gm28631-201ENSMUST00000190740 334 ntBASIC8.87□□□□□ -0.99
Trav3-3Q5R1C3 Gm7558-201ENSMUST00000193221 1165 ntBASIC8.87□□□□□ -0.99
Trav3-3Q5R1C3 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Trav3-3Q5R1C3 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC8.87□□□□□ -0.99
Trav3-3Q5R1C3 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trav3-3Q5R1C3 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
Trav3-3Q5R1C3 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
Trav3-3Q5R1C3 Ces2h-201ENSMUST00000172032 2445 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
Trav3-3Q5R1C3 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trav3-3Q5R1C3 Trappc9-202ENSMUST00000089770 4047 ntAPPRIS P4 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trav3-3Q5R1C3 Themis2-201ENSMUST00000045154 3079 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trav3-3Q5R1C3 Dusp16-202ENSMUST00000129433 3993 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trav3-3Q5R1C3 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trav3-3Q5R1C3 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trav3-3Q5R1C3 Anln-201ENSMUST00000040912 4605 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trav3-3Q5R1C3 Nlgn1-205ENSMUST00000193603 11807 ntAPPRIS P3 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trav3-3Q5R1C3 1700018A04Rik-204ENSMUST00000221561 2569 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Trav3-3Q5R1C3 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Trav3-3Q5R1C3 Ap1b1-201ENSMUST00000009234 4085 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trav3-3Q5R1C3 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trav3-3Q5R1C3 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trav3-3Q5R1C3 Sept9-204ENSMUST00000106349 2932 ntAPPRIS P3 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trav3-3Q5R1C3 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trav3-3Q5R1C3 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Trav3-3Q5R1C3 9430064I24Rik-201ENSMUST00000206516 2669 ntBASIC8.87□□□□□ -0.99
Trav3-3Q5R1C3 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trav3-3Q5R1C3 AC101945.2-201ENSMUST00000227886 1377 ntBASIC8.86□□□□□ -0.99
Trav3-3Q5R1C3 Pard3-213ENSMUST00000160766 4949 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.99
Trav3-3Q5R1C3 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trav3-3Q5R1C3 Dcun1d4-203ENSMUST00000113558 4023 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Trav3-3Q5R1C3 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.99
Trav3-3Q5R1C3 Trem1-201ENSMUST00000048782 2993 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trav3-3Q5R1C3 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trav3-3Q5R1C3 Gm15544-201ENSMUST00000118776 1531 ntBASIC8.86□□□□□ -0.99
Trav3-3Q5R1C3 Rrm2b-201ENSMUST00000022901 4561 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trav3-3Q5R1C3 Gm19680-201ENSMUST00000095050 1513 ntBASIC8.86□□□□□ -0.99
Trav3-3Q5R1C3 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trav3-3Q5R1C3 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Trav3-3Q5R1C3 Itih3-205ENSMUST00000227995 2100 ntAPPRIS ALT2 BASIC8.86□□□□□ -0.99
Trav3-3Q5R1C3 Acss3-203ENSMUST00000165067 4696 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
Trav3-3Q5R1C3 Gm4884-201ENSMUST00000164422 2852 ntAPPRIS P1 TSL 2 BASIC8.86□□□□□ -0.99
Trav3-3Q5R1C3 Tchhl1-201ENSMUST00000029516 2066 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trav3-3Q5R1C3 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Trav3-3Q5R1C3 AC154527.2-201ENSMUST00000225256 1466 ntBASIC8.86□□□□□ -0.99
Trav3-3Q5R1C3 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trav3-3Q5R1C3 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trav3-3Q5R1C3 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC8.86□□□□□ -0.99
Trav3-3Q5R1C3 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC8.86□□□□□ -0.99
Trav3-3Q5R1C3 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC8.86□□□□□ -0.99
Trav3-3Q5R1C3 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trav3-3Q5R1C3 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trav3-3Q5R1C3 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC8.86□□□□□ -0.99
Trav3-3Q5R1C3 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC8.86□□□□□ -0.99
Trav3-3Q5R1C3 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC8.86□□□□□ -0.99
Trav3-3Q5R1C3 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trav3-3Q5R1C3 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC8.86□□□□□ -0.99
Trav3-3Q5R1C3 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trav3-3Q5R1C3 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Trav3-3Q5R1C3 Zfp959-201ENSMUST00000054780 2028 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trav3-3Q5R1C3 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.99
Trav3-3Q5R1C3 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
Trav3-3Q5R1C3 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trav3-3Q5R1C3 Platr4-203ENSMUST00000199155 2161 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Trav3-3Q5R1C3 Rnpc3-201ENSMUST00000092154 3888 ntAPPRIS P3 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trav3-3Q5R1C3 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trav3-3Q5R1C3 Gm30648-202ENSMUST00000200648 1957 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Trav3-3Q5R1C3 Abhd6-203ENSMUST00000225234 1958 ntBASIC8.86□□□□□ -0.99
Trav3-3Q5R1C3 Gpr155-204ENSMUST00000112044 4201 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.99
Trav3-3Q5R1C3 Ccdc93-202ENSMUST00000112621 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trav3-3Q5R1C3 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trav3-3Q5R1C3 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC8.86□□□□□ -0.99
Trav3-3Q5R1C3 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trav3-3Q5R1C3 Abca3-203ENSMUST00000117337 5202 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trav3-3Q5R1C3 Pa2g4-202ENSMUST00000131728 2483 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trav3-3Q5R1C3 Slitrk1-201ENSMUST00000100322 5359 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
Trav3-3Q5R1C3 Oas1h-201ENSMUST00000072476 1703 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trav3-3Q5R1C3 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC8.85□□□□□ -0.99
Trav3-3Q5R1C3 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trav3-3Q5R1C3 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trav3-3Q5R1C3 Gm16478-201ENSMUST00000208113 5084 ntBASIC8.85□□□□□ -0.99
Trav3-3Q5R1C3 Bsn-201ENSMUST00000035208 15938 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
Trav3-3Q5R1C3 Exoc4-202ENSMUST00000090381 2598 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Trav3-3Q5R1C3 AC165148.1-201ENSMUST00000224795 2372 ntBASIC8.85□□□□□ -0.99
Trav3-3Q5R1C3 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trav3-3Q5R1C3 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trav3-3Q5R1C3 Lrrc8b-201ENSMUST00000112707 6726 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trav3-3Q5R1C3 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC8.85□□□□□ -0.99
Trav3-3Q5R1C3 Gm18227-201ENSMUST00000211082 1468 ntBASIC8.85□□□□□ -0.99
Trav3-3Q5R1C3 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trav3-3Q5R1C3 Pigo-202ENSMUST00000098109 4239 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trav3-3Q5R1C3 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
Trav3-3Q5R1C3 Osbpl7-206ENSMUST00000168565 3535 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
Trav3-3Q5R1C3 Cux1-211ENSMUST00000176745 2831 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Trav3-3Q5R1C3 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trav3-3Q5R1C3 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trav3-3Q5R1C3 Dffa-201ENSMUST00000030816 2457 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trav3-3Q5R1C3 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC8.85□□□□□ -0.99
Trav3-3Q5R1C3 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms