Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC13.7□□□□□ -0.22
Rc3h1Q4VGL6 Gm29499-201ENSMUST00000189151 486 ntBASIC13.7□□□□□ -0.22
Rc3h1Q4VGL6 Gm28329-201ENSMUST00000191208 689 ntBASIC13.7□□□□□ -0.22
Rc3h1Q4VGL6 Gm29171-201ENSMUST00000191397 486 ntBASIC13.7□□□□□ -0.22
Rc3h1Q4VGL6 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC13.7□□□□□ -0.22
Rc3h1Q4VGL6 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC13.7□□□□□ -0.22
Rc3h1Q4VGL6 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC13.7□□□□□ -0.22
Rc3h1Q4VGL6 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rc3h1Q4VGL6 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC13.7□□□□□ -0.22
Rc3h1Q4VGL6 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC13.7□□□□□ -0.22
Rc3h1Q4VGL6 AC141438.2-201ENSMUST00000215068 271 ntBASIC13.7□□□□□ -0.22
Rc3h1Q4VGL6 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rc3h1Q4VGL6 AC129219.2-201ENSMUST00000224324 701 ntBASIC13.7□□□□□ -0.22
Rc3h1Q4VGL6 AC135114.1-201ENSMUST00000228682 270 ntBASIC13.7□□□□□ -0.22
Rc3h1Q4VGL6 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rc3h1Q4VGL6 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rc3h1Q4VGL6 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rc3h1Q4VGL6 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rc3h1Q4VGL6 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rc3h1Q4VGL6 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rc3h1Q4VGL6 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rc3h1Q4VGL6 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rc3h1Q4VGL6 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rc3h1Q4VGL6 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC13.7□□□□□ -0.22
Rc3h1Q4VGL6 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rc3h1Q4VGL6 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rc3h1Q4VGL6 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rc3h1Q4VGL6 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rc3h1Q4VGL6 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Rc3h1Q4VGL6 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC13.69□□□□□ -0.22
Rc3h1Q4VGL6 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rc3h1Q4VGL6 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rc3h1Q4VGL6 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rc3h1Q4VGL6 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rc3h1Q4VGL6 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rc3h1Q4VGL6 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Rc3h1Q4VGL6 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Rc3h1Q4VGL6 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rc3h1Q4VGL6 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rc3h1Q4VGL6 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rc3h1Q4VGL6 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rc3h1Q4VGL6 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Rc3h1Q4VGL6 Gm11836-201ENSMUST00000121022 441 ntBASIC13.69□□□□□ -0.22
Rc3h1Q4VGL6 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Rc3h1Q4VGL6 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rc3h1Q4VGL6 Gm45398-201ENSMUST00000210561 165 ntBASIC13.69□□□□□ -0.22
Rc3h1Q4VGL6 Gm45574-201ENSMUST00000210921 331 ntBASIC13.69□□□□□ -0.22
Rc3h1Q4VGL6 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Rc3h1Q4VGL6 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rc3h1Q4VGL6 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Rc3h1Q4VGL6 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC13.69□□□□□ -0.22
Rc3h1Q4VGL6 Gm18974-201ENSMUST00000221478 1031 ntBASIC13.69□□□□□ -0.22
Rc3h1Q4VGL6 AC112945.1-201ENSMUST00000226413 514 ntBASIC13.69□□□□□ -0.22
Rc3h1Q4VGL6 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Rc3h1Q4VGL6 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rc3h1Q4VGL6 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rc3h1Q4VGL6 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rc3h1Q4VGL6 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rc3h1Q4VGL6 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rc3h1Q4VGL6 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rc3h1Q4VGL6 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rc3h1Q4VGL6 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rc3h1Q4VGL6 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rc3h1Q4VGL6 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rc3h1Q4VGL6 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rc3h1Q4VGL6 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC13.69□□□□□ -0.22
Rc3h1Q4VGL6 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rc3h1Q4VGL6 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Rc3h1Q4VGL6 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rc3h1Q4VGL6 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rc3h1Q4VGL6 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rc3h1Q4VGL6 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Rc3h1Q4VGL6 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rc3h1Q4VGL6 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC13.68□□□□□ -0.22
Rc3h1Q4VGL6 CT009489.1-201ENSMUST00000227740 1893 ntBASIC13.68□□□□□ -0.22
Rc3h1Q4VGL6 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rc3h1Q4VGL6 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rc3h1Q4VGL6 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rc3h1Q4VGL6 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC13.68□□□□□ -0.22
Rc3h1Q4VGL6 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rc3h1Q4VGL6 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rc3h1Q4VGL6 Gm8459-201ENSMUST00000162504 760 ntBASIC13.68□□□□□ -0.22
Rc3h1Q4VGL6 Gm3150-201ENSMUST00000166418 204 ntBASIC13.68□□□□□ -0.22
Rc3h1Q4VGL6 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Rc3h1Q4VGL6 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rc3h1Q4VGL6 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC13.68□□□□□ -0.22
Rc3h1Q4VGL6 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC13.68□□□□□ -0.22
Rc3h1Q4VGL6 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC13.68□□□□□ -0.22
Rc3h1Q4VGL6 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Rc3h1Q4VGL6 Gm43186-201ENSMUST00000198130 824 ntBASIC13.68□□□□□ -0.22
Rc3h1Q4VGL6 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rc3h1Q4VGL6 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC13.68□□□□□ -0.22
Rc3h1Q4VGL6 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC13.68□□□□□ -0.22
Rc3h1Q4VGL6 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rc3h1Q4VGL6 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rc3h1Q4VGL6 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rc3h1Q4VGL6 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Rc3h1Q4VGL6 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rc3h1Q4VGL6 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rc3h1Q4VGL6 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms