Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Syne3Q4FZC9 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Syne3Q4FZC9 Gm45011-201ENSMUST00000207620 2297 ntBASIC12.57□□□□□ -0.4
Syne3Q4FZC9 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Syne3Q4FZC9 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Syne3Q4FZC9 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Syne3Q4FZC9 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Syne3Q4FZC9 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC12.56□□□□□ -0.4
Syne3Q4FZC9 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Syne3Q4FZC9 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Syne3Q4FZC9 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Syne3Q4FZC9 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Syne3Q4FZC9 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Syne3Q4FZC9 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Syne3Q4FZC9 Gm12201-201ENSMUST00000120657 1234 ntBASIC12.56□□□□□ -0.4
Syne3Q4FZC9 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC12.56□□□□□ -0.4
Syne3Q4FZC9 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Syne3Q4FZC9 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Syne3Q4FZC9 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC12.56□□□□□ -0.4
Syne3Q4FZC9 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Syne3Q4FZC9 Gm38241-201ENSMUST00000192641 898 ntBASIC12.56□□□□□ -0.4
Syne3Q4FZC9 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Syne3Q4FZC9 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC12.56□□□□□ -0.4
Syne3Q4FZC9 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC12.56□□□□□ -0.4
Syne3Q4FZC9 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Syne3Q4FZC9 CT571245.2-201ENSMUST00000218421 305 ntBASIC12.56□□□□□ -0.4
Syne3Q4FZC9 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC12.56□□□□□ -0.4
Syne3Q4FZC9 CT573034.1-201ENSMUST00000222983 313 ntBASIC12.56□□□□□ -0.4
Syne3Q4FZC9 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Syne3Q4FZC9 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC12.56□□□□□ -0.4
Syne3Q4FZC9 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Syne3Q4FZC9 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Syne3Q4FZC9 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Syne3Q4FZC9 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Syne3Q4FZC9 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Syne3Q4FZC9 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Syne3Q4FZC9 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Syne3Q4FZC9 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Syne3Q4FZC9 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Syne3Q4FZC9 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Syne3Q4FZC9 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Syne3Q4FZC9 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Syne3Q4FZC9 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Syne3Q4FZC9 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Syne3Q4FZC9 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Syne3Q4FZC9 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Syne3Q4FZC9 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
Syne3Q4FZC9 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Syne3Q4FZC9 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Syne3Q4FZC9 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Syne3Q4FZC9 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Syne3Q4FZC9 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Syne3Q4FZC9 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC12.55□□□□□ -0.4
Syne3Q4FZC9 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Syne3Q4FZC9 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Syne3Q4FZC9 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Syne3Q4FZC9 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Syne3Q4FZC9 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Syne3Q4FZC9 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
Syne3Q4FZC9 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC12.55□□□□□ -0.4
Syne3Q4FZC9 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Syne3Q4FZC9 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Syne3Q4FZC9 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC12.55□□□□□ -0.4
Syne3Q4FZC9 Gm12036-201ENSMUST00000120008 530 ntBASIC12.55□□□□□ -0.4
Syne3Q4FZC9 Gm14247-201ENSMUST00000120950 237 ntBASIC12.55□□□□□ -0.4
Syne3Q4FZC9 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Syne3Q4FZC9 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC12.55□□□□□ -0.4
Syne3Q4FZC9 Gm27627-201ENSMUST00000183644 150 ntBASIC12.55□□□□□ -0.4
Syne3Q4FZC9 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC12.55□□□□□ -0.4
Syne3Q4FZC9 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC12.55□□□□□ -0.4
Syne3Q4FZC9 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC12.55□□□□□ -0.4
Syne3Q4FZC9 Gm18212-201ENSMUST00000211678 889 ntBASIC12.55□□□□□ -0.4
Syne3Q4FZC9 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Syne3Q4FZC9 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Syne3Q4FZC9 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Syne3Q4FZC9 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Syne3Q4FZC9 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Syne3Q4FZC9 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Syne3Q4FZC9 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Syne3Q4FZC9 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Syne3Q4FZC9 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Syne3Q4FZC9 Gm5847-201ENSMUST00000178959 1595 ntBASIC12.55□□□□□ -0.4
Syne3Q4FZC9 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Syne3Q4FZC9 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Syne3Q4FZC9 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Syne3Q4FZC9 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC12.55□□□□□ -0.4
Syne3Q4FZC9 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Syne3Q4FZC9 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Syne3Q4FZC9 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Syne3Q4FZC9 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Syne3Q4FZC9 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Syne3Q4FZC9 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Syne3Q4FZC9 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Syne3Q4FZC9 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Syne3Q4FZC9 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.54□□□□□ -0.4
Syne3Q4FZC9 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC12.54□□□□□ -0.4
Syne3Q4FZC9 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Syne3Q4FZC9 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Syne3Q4FZC9 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC12.54□□□□□ -0.4
Syne3Q4FZC9 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms