Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Cks1brtQ3UNC9 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Cks1brtQ3UNC9 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Cks1brtQ3UNC9 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Cks1brtQ3UNC9 Myo16-202ENSMUST00000207204 6719 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Cks1brtQ3UNC9 Nphs1-203ENSMUST00000126297 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
Cks1brtQ3UNC9 AC154171.2-201ENSMUST00000225219 2652 ntBASIC8.45□□□□□ -1.06
Cks1brtQ3UNC9 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Cks1brtQ3UNC9 9530059O14Rik-201ENSMUST00000181107 3978 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Cks1brtQ3UNC9 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Cks1brtQ3UNC9 Pkd1l2-201ENSMUST00000098375 7386 ntAPPRIS P2 TSL 5 BASIC8.45□□□□□ -1.06
Cks1brtQ3UNC9 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC8.45□□□□□ -1.06
Cks1brtQ3UNC9 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
Cks1brtQ3UNC9 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Cks1brtQ3UNC9 Myo15-201ENSMUST00000071880 11769 ntAPPRIS P4 TSL 5 BASIC8.44□□□□□ -1.06
Cks1brtQ3UNC9 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Cks1brtQ3UNC9 Ldlr-201ENSMUST00000034713 4627 ntAPPRIS P2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Cks1brtQ3UNC9 Myo1c-202ENSMUST00000102504 4659 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Cks1brtQ3UNC9 Zfp451-202ENSMUST00000044455 11876 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Cks1brtQ3UNC9 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC8.44□□□□□ -1.06
Cks1brtQ3UNC9 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
Cks1brtQ3UNC9 Tardbp-202ENSMUST00000084125 7477 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Cks1brtQ3UNC9 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Cks1brtQ3UNC9 Gm37954-201ENSMUST00000195400 2071 ntBASIC8.44□□□□□ -1.06
Cks1brtQ3UNC9 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Cks1brtQ3UNC9 Gphb5-201ENSMUST00000051079 1612 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Cks1brtQ3UNC9 Cgnl1-201ENSMUST00000072899 6754 ntAPPRIS P2 TSL 5 BASIC8.44□□□□□ -1.06
Cks1brtQ3UNC9 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Cks1brtQ3UNC9 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC8.44□□□□□ -1.06
Cks1brtQ3UNC9 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Cks1brtQ3UNC9 Nfya-202ENSMUST00000078800 3653 ntAPPRIS ALT1 TSL 5 BASIC8.44□□□□□ -1.06
Cks1brtQ3UNC9 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Cks1brtQ3UNC9 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Cks1brtQ3UNC9 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Cks1brtQ3UNC9 Erc2-205ENSMUST00000210135 6233 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Cks1brtQ3UNC9 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC8.44□□□□□ -1.06
Cks1brtQ3UNC9 Gm4913-201ENSMUST00000117075 1290 ntBASIC8.44□□□□□ -1.06
Cks1brtQ3UNC9 Gm12416-201ENSMUST00000120911 1008 ntBASIC8.44□□□□□ -1.06
Cks1brtQ3UNC9 Gm5863-201ENSMUST00000121760 1008 ntBASIC8.44□□□□□ -1.06
Cks1brtQ3UNC9 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC8.44□□□□□ -1.06
Cks1brtQ3UNC9 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Cks1brtQ3UNC9 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Cks1brtQ3UNC9 Cd63-ps-201ENSMUST00000145417 875 ntBASIC8.44□□□□□ -1.06
Cks1brtQ3UNC9 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Cks1brtQ3UNC9 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
Cks1brtQ3UNC9 Gm18733-201ENSMUST00000173950 856 ntBASIC8.44□□□□□ -1.06
Cks1brtQ3UNC9 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC8.44□□□□□ -1.06
Cks1brtQ3UNC9 Gm28693-202ENSMUST00000190758 331 ntBASIC8.44□□□□□ -1.06
Cks1brtQ3UNC9 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Cks1brtQ3UNC9 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Cks1brtQ3UNC9 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
Cks1brtQ3UNC9 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Cks1brtQ3UNC9 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Cks1brtQ3UNC9 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC8.44□□□□□ -1.06
Cks1brtQ3UNC9 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
Cks1brtQ3UNC9 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Cks1brtQ3UNC9 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
Cks1brtQ3UNC9 Dock4-204ENSMUST00000220912 7360 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Cks1brtQ3UNC9 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Cks1brtQ3UNC9 Ddx25-201ENSMUST00000034612 6934 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Cks1brtQ3UNC9 Pde11a-201ENSMUST00000099992 4189 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Cks1brtQ3UNC9 Ddr1-212ENSMUST00000166980 3627 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
Cks1brtQ3UNC9 AC125374.1-201ENSMUST00000213573 1400 ntBASIC8.44□□□□□ -1.06
Cks1brtQ3UNC9 Mms19-201ENSMUST00000026168 3162 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
Cks1brtQ3UNC9 Gm37048-201ENSMUST00000194827 5578 ntBASIC8.44□□□□□ -1.06
Cks1brtQ3UNC9 Diaph1-201ENSMUST00000025337 5596 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
Cks1brtQ3UNC9 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Cks1brtQ3UNC9 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
Cks1brtQ3UNC9 Brca2-210ENSMUST00000202313 10517 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Cks1brtQ3UNC9 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC8.44□□□□□ -1.06
Cks1brtQ3UNC9 Rnf43-202ENSMUST00000092800 4037 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
Cks1brtQ3UNC9 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Cks1brtQ3UNC9 Ncapd3-202ENSMUST00000086198 4675 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Cks1brtQ3UNC9 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Cks1brtQ3UNC9 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Cks1brtQ3UNC9 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC8.43□□□□□ -1.06
Cks1brtQ3UNC9 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC8.43□□□□□ -1.06
Cks1brtQ3UNC9 1700030K09Rik-202ENSMUST00000121902 2373 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.06
Cks1brtQ3UNC9 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Cks1brtQ3UNC9 Gm16486-201ENSMUST00000212436 4584 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
Cks1brtQ3UNC9 Gm14005-209ENSMUST00000224993 1832 ntBASIC8.43□□□□□ -1.06
Cks1brtQ3UNC9 Smarcc2-203ENSMUST00000105235 4032 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
Cks1brtQ3UNC9 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Cks1brtQ3UNC9 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Cks1brtQ3UNC9 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Cks1brtQ3UNC9 Fbrs-201ENSMUST00000048896 2650 ntAPPRIS P2 TSL 5 BASIC8.43□□□□□ -1.06
Cks1brtQ3UNC9 Gm42641-202ENSMUST00000160217 4248 ntAPPRIS P5 TSL 2 BASIC8.43□□□□□ -1.06
Cks1brtQ3UNC9 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Cks1brtQ3UNC9 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Cks1brtQ3UNC9 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Cks1brtQ3UNC9 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Cks1brtQ3UNC9 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Cks1brtQ3UNC9 Gm12036-201ENSMUST00000120008 530 ntBASIC8.43□□□□□ -1.06
Cks1brtQ3UNC9 Gm15703-201ENSMUST00000120250 880 ntBASIC8.43□□□□□ -1.06
Cks1brtQ3UNC9 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC8.43□□□□□ -1.06
Cks1brtQ3UNC9 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Cks1brtQ3UNC9 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Cks1brtQ3UNC9 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC8.43□□□□□ -1.06
Cks1brtQ3UNC9 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC8.43□□□□□ -1.06
Cks1brtQ3UNC9 Gm6652-201ENSMUST00000186414 1070 ntBASIC8.43□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms