Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Gm20610-201ENSMUST00000176406 587 ntTSL 5 BASIC10.84□□□□□ -0.67
Spg11Q3UHA3 Gm38145-201ENSMUST00000192319 693 ntBASIC10.84□□□□□ -0.67
Spg11Q3UHA3 Calca-207ENSMUST00000206853 720 ntTSL 2 BASIC10.84□□□□□ -0.67
Spg11Q3UHA3 Gm5996-201ENSMUST00000211110 718 ntBASIC10.84□□□□□ -0.67
Spg11Q3UHA3 Gm46349-201ENSMUST00000219678 917 ntTSL 5 BASIC10.84□□□□□ -0.67
Spg11Q3UHA3 AC158986.2-201ENSMUST00000227487 618 ntBASIC10.84□□□□□ -0.67
Spg11Q3UHA3 4933407L21Rik-201ENSMUST00000027426 1146 ntAPPRIS P5 TSL 1 (best) BASIC10.84□□□□□ -0.67
Spg11Q3UHA3 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Spg11Q3UHA3 Eif4ebp3-201ENSMUST00000036765 744 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Spg11Q3UHA3 Rps9-201ENSMUST00000006496 751 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Spg11Q3UHA3 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Spg11Q3UHA3 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Spg11Q3UHA3 Gm20052-201ENSMUST00000200831 1525 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Spg11Q3UHA3 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.67
Spg11Q3UHA3 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Spg11Q3UHA3 Gm29100-201ENSMUST00000187564 4410 ntBASIC10.83□□□□□ -0.68
Spg11Q3UHA3 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Spg11Q3UHA3 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Spg11Q3UHA3 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Spg11Q3UHA3 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Spg11Q3UHA3 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC10.83□□□□□ -0.68
Spg11Q3UHA3 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Spg11Q3UHA3 Gm37348-201ENSMUST00000193104 1789 ntBASIC10.83□□□□□ -0.68
Spg11Q3UHA3 Gm43858-201ENSMUST00000199418 1778 ntBASIC10.83□□□□□ -0.68
Spg11Q3UHA3 Mir704-201ENSMUST00000102106 77 ntBASIC10.83□□□□□ -0.68
Spg11Q3UHA3 Ncbp2-202ENSMUST00000115178 515 ntTSL 5 BASIC10.83□□□□□ -0.68
Spg11Q3UHA3 Gm15374-201ENSMUST00000119313 844 ntBASIC10.83□□□□□ -0.68
Spg11Q3UHA3 Gm6441-201ENSMUST00000120983 696 ntBASIC10.83□□□□□ -0.68
Spg11Q3UHA3 Gm9034-201ENSMUST00000182071 1005 ntBASIC10.83□□□□□ -0.68
Spg11Q3UHA3 AC164614.1-201ENSMUST00000216038 397 ntBASIC10.83□□□□□ -0.68
Spg11Q3UHA3 Gm7242-201ENSMUST00000221134 705 ntBASIC10.83□□□□□ -0.68
Spg11Q3UHA3 AC154433.1-201ENSMUST00000224401 1183 ntBASIC10.83□□□□□ -0.68
Spg11Q3UHA3 Rnasek-201ENSMUST00000040428 611 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Spg11Q3UHA3 Ttc24-202ENSMUST00000064550 671 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Spg11Q3UHA3 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC10.83□□□□□ -0.68
Spg11Q3UHA3 Gas7-202ENSMUST00000108680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Spg11Q3UHA3 Gm2420-201ENSMUST00000119864 2149 ntBASIC10.83□□□□□ -0.68
Spg11Q3UHA3 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Spg11Q3UHA3 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Spg11Q3UHA3 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Spg11Q3UHA3 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Spg11Q3UHA3 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC10.83□□□□□ -0.68
Spg11Q3UHA3 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC10.83□□□□□ -0.68
Spg11Q3UHA3 Stard6-206ENSMUST00000174118 1185 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Spg11Q3UHA3 Gm9369-201ENSMUST00000196009 733 ntBASIC10.83□□□□□ -0.68
Spg11Q3UHA3 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC10.83□□□□□ -0.68
Spg11Q3UHA3 AC118639.2-201ENSMUST00000226289 223 ntBASIC10.83□□□□□ -0.68
Spg11Q3UHA3 Clec1b-201ENSMUST00000032262 1090 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Spg11Q3UHA3 Defb29-201ENSMUST00000060598 462 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Spg11Q3UHA3 Gm10134-201ENSMUST00000074761 381 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Spg11Q3UHA3 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Spg11Q3UHA3 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Spg11Q3UHA3 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Spg11Q3UHA3 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Spg11Q3UHA3 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Spg11Q3UHA3 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Spg11Q3UHA3 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Spg11Q3UHA3 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Spg11Q3UHA3 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Spg11Q3UHA3 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Spg11Q3UHA3 Gsta3-202ENSMUST00000121676 894 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Spg11Q3UHA3 Gemin7-205ENSMUST00000122127 652 ntAPPRIS P1 TSL 3 BASIC10.82□□□□□ -0.68
Spg11Q3UHA3 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Spg11Q3UHA3 Gm9102-201ENSMUST00000219250 465 ntBASIC10.82□□□□□ -0.68
Spg11Q3UHA3 Nnmt-201ENSMUST00000034808 1043 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Spg11Q3UHA3 Ggta1-201ENSMUST00000044255 1221 ntAPPRIS P3 TSL 5 BASIC10.82□□□□□ -0.68
Spg11Q3UHA3 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Spg11Q3UHA3 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.68
Spg11Q3UHA3 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Spg11Q3UHA3 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Spg11Q3UHA3 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Spg11Q3UHA3 Lrp2bp-201ENSMUST00000066451 1525 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Spg11Q3UHA3 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Spg11Q3UHA3 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Spg11Q3UHA3 Gm8146-201ENSMUST00000192106 1847 ntBASIC10.82□□□□□ -0.68
Spg11Q3UHA3 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Spg11Q3UHA3 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Spg11Q3UHA3 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Spg11Q3UHA3 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Spg11Q3UHA3 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Spg11Q3UHA3 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Spg11Q3UHA3 Gm11655-201ENSMUST00000153899 765 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Spg11Q3UHA3 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Spg11Q3UHA3 Gm27316-201ENSMUST00000184884 277 ntBASIC10.82□□□□□ -0.68
Spg11Q3UHA3 Gm30946-201ENSMUST00000198288 724 ntBASIC10.82□□□□□ -0.68
Spg11Q3UHA3 Gm9523-201ENSMUST00000199146 1159 ntBASIC10.82□□□□□ -0.68
Spg11Q3UHA3 Gal-201ENSMUST00000025842 712 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Spg11Q3UHA3 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Spg11Q3UHA3 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Spg11Q3UHA3 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Spg11Q3UHA3 Olfr1394-201ENSMUST00000052668 939 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Spg11Q3UHA3 1110034G24Rik-201ENSMUST00000061891 1076 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Spg11Q3UHA3 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Spg11Q3UHA3 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC10.81□□□□□ -0.68
Spg11Q3UHA3 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Spg11Q3UHA3 Gm38246-201ENSMUST00000194318 1511 ntBASIC10.81□□□□□ -0.68
Spg11Q3UHA3 Gm5308-201ENSMUST00000196752 1354 ntBASIC10.81□□□□□ -0.68
Spg11Q3UHA3 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Spg11Q3UHA3 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Spg11Q3UHA3 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms