Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
SgcbP82349 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
SgcbP82349 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC10.59□□□□□ -0.71
SgcbP82349 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC10.59□□□□□ -0.71
SgcbP82349 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC10.59□□□□□ -0.71
SgcbP82349 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
SgcbP82349 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
SgcbP82349 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
SgcbP82349 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
SgcbP82349 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
SgcbP82349 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
SgcbP82349 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC10.59□□□□□ -0.71
SgcbP82349 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
SgcbP82349 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
SgcbP82349 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
SgcbP82349 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
SgcbP82349 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
SgcbP82349 Gm14539-201ENSMUST00000117527 174 ntBASIC10.59□□□□□ -0.71
SgcbP82349 Gm4909-201ENSMUST00000118749 794 ntBASIC10.59□□□□□ -0.71
SgcbP82349 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC10.59□□□□□ -0.71
SgcbP82349 Gm6039-201ENSMUST00000121667 1250 ntBASIC10.59□□□□□ -0.71
SgcbP82349 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
SgcbP82349 Gm25881-201ENSMUST00000157783 103 ntBASIC10.59□□□□□ -0.71
SgcbP82349 Gm5732-201ENSMUST00000182596 1007 ntBASIC10.59□□□□□ -0.71
SgcbP82349 Gm20834-202ENSMUST00000185576 1220 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
SgcbP82349 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
SgcbP82349 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
SgcbP82349 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
SgcbP82349 Gm44414-201ENSMUST00000203660 2109 ntBASIC10.59□□□□□ -0.71
SgcbP82349 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC10.59□□□□□ -0.71
SgcbP82349 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC10.59□□□□□ -0.71
SgcbP82349 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
SgcbP82349 AC156801.1-201ENSMUST00000216158 493 ntTSL 5 BASIC10.59□□□□□ -0.71
SgcbP82349 Gm21027-201ENSMUST00000219300 1236 ntBASIC10.59□□□□□ -0.71
SgcbP82349 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
SgcbP82349 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
SgcbP82349 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
SgcbP82349 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
SgcbP82349 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
SgcbP82349 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC10.59□□□□□ -0.71
SgcbP82349 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
SgcbP82349 Adcy8-202ENSMUST00000228014 6900 ntAPPRIS ALT2 BASIC10.59□□□□□ -0.71
SgcbP82349 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC10.59□□□□□ -0.71
SgcbP82349 Dock6-207ENSMUST00000217336 6880 ntAPPRIS P2 TSL 5 BASIC10.59□□□□□ -0.71
SgcbP82349 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
SgcbP82349 Gm29895-201ENSMUST00000209933 5652 ntTSL 5 BASIC10.59□□□□□ -0.71
SgcbP82349 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
SgcbP82349 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
SgcbP82349 Cln8-201ENSMUST00000027554 6857 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
SgcbP82349 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
SgcbP82349 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
SgcbP82349 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.71
SgcbP82349 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SgcbP82349 Milr1-202ENSMUST00000106794 1514 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
SgcbP82349 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC10.58□□□□□ -0.72
SgcbP82349 Gm8155-201ENSMUST00000216363 1612 ntBASIC10.58□□□□□ -0.72
SgcbP82349 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
SgcbP82349 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SgcbP82349 Gm10652-201ENSMUST00000199790 2622 ntBASIC10.58□□□□□ -0.72
SgcbP82349 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SgcbP82349 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SgcbP82349 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
SgcbP82349 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
SgcbP82349 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
SgcbP82349 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
SgcbP82349 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SgcbP82349 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC10.58□□□□□ -0.72
SgcbP82349 Gm37269-201ENSMUST00000193906 1891 ntBASIC10.58□□□□□ -0.72
SgcbP82349 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
SgcbP82349 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
SgcbP82349 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SgcbP82349 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
SgcbP82349 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
SgcbP82349 Gm23596-201ENSMUST00000104304 132 ntBASIC10.58□□□□□ -0.72
SgcbP82349 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SgcbP82349 Gm12501-201ENSMUST00000119163 529 ntBASIC10.58□□□□□ -0.72
SgcbP82349 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC10.58□□□□□ -0.72
SgcbP82349 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SgcbP82349 Mir670hg-205ENSMUST00000210851 1148 ntTSL 5 BASIC10.58□□□□□ -0.72
SgcbP82349 AC155637.1-201ENSMUST00000218560 636 ntBASIC10.58□□□□□ -0.72
SgcbP82349 Olfr258-ps1-202ENSMUST00000218625 1085 ntTSL 5 BASIC10.58□□□□□ -0.72
SgcbP82349 AC133602.1-201ENSMUST00000227510 509 ntBASIC10.58□□□□□ -0.72
SgcbP82349 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SgcbP82349 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SgcbP82349 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC10.58□□□□□ -0.72
SgcbP82349 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
SgcbP82349 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
SgcbP82349 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SgcbP82349 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC10.58□□□□□ -0.72
SgcbP82349 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC10.58□□□□□ -0.72
SgcbP82349 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
SgcbP82349 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SgcbP82349 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC10.58□□□□□ -0.72
SgcbP82349 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
SgcbP82349 Gm42829-201ENSMUST00000198417 2585 ntBASIC10.58□□□□□ -0.72
SgcbP82349 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
SgcbP82349 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
SgcbP82349 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
SgcbP82349 Fn1-203ENSMUST00000186129 7797 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
SgcbP82349 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms