Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.8□□□□□ -0.36
CiitaP79621 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CiitaP79621 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CiitaP79621 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CiitaP79621 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CiitaP79621 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CiitaP79621 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CiitaP79621 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12.8□□□□□ -0.36
CiitaP79621 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CiitaP79621 AC154517.2-201ENSMUST00000220829 2458 ntBASIC12.8□□□□□ -0.36
CiitaP79621 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CiitaP79621 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CiitaP79621 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
CiitaP79621 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CiitaP79621 Mir3547-201ENSMUST00000175461 88 ntBASIC12.8□□□□□ -0.36
CiitaP79621 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CiitaP79621 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
CiitaP79621 Gm8285-201ENSMUST00000208293 759 ntBASIC12.8□□□□□ -0.36
CiitaP79621 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.8□□□□□ -0.36
CiitaP79621 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC12.8□□□□□ -0.36
CiitaP79621 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CiitaP79621 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
CiitaP79621 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
CiitaP79621 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CiitaP79621 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC12.8□□□□□ -0.36
CiitaP79621 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CiitaP79621 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
CiitaP79621 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CiitaP79621 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
CiitaP79621 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.8□□□□□ -0.36
CiitaP79621 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CiitaP79621 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
CiitaP79621 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.8□□□□□ -0.36
CiitaP79621 CT009489.1-201ENSMUST00000227740 1893 ntBASIC12.8□□□□□ -0.36
CiitaP79621 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
CiitaP79621 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CiitaP79621 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CiitaP79621 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
CiitaP79621 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CiitaP79621 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC12.8□□□□□ -0.36
CiitaP79621 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CiitaP79621 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CiitaP79621 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.79□□□□□ -0.36
CiitaP79621 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CiitaP79621 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CiitaP79621 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CiitaP79621 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CiitaP79621 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CiitaP79621 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CiitaP79621 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CiitaP79621 Gm44999-201ENSMUST00000207456 1493 ntBASIC12.79□□□□□ -0.36
CiitaP79621 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CiitaP79621 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CiitaP79621 AC156031.2-201ENSMUST00000213107 3310 ntBASIC12.79□□□□□ -0.36
CiitaP79621 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.79□□□□□ -0.36
CiitaP79621 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CiitaP79621 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.79□□□□□ -0.36
CiitaP79621 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
CiitaP79621 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
CiitaP79621 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CiitaP79621 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CiitaP79621 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CiitaP79621 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CiitaP79621 Gm11960-201ENSMUST00000122068 925 ntBASIC12.79□□□□□ -0.36
CiitaP79621 Gm8737-201ENSMUST00000122208 642 ntBASIC12.79□□□□□ -0.36
CiitaP79621 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC12.79□□□□□ -0.36
CiitaP79621 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC12.79□□□□□ -0.36
CiitaP79621 Gm5051-201ENSMUST00000204085 485 ntBASIC12.79□□□□□ -0.36
CiitaP79621 Gm45398-201ENSMUST00000210561 165 ntBASIC12.79□□□□□ -0.36
CiitaP79621 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CiitaP79621 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC12.79□□□□□ -0.36
CiitaP79621 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC12.79□□□□□ -0.36
CiitaP79621 AC129219.2-201ENSMUST00000224324 701 ntBASIC12.79□□□□□ -0.36
CiitaP79621 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
CiitaP79621 Gm10179-201ENSMUST00000086233 688 ntBASIC12.79□□□□□ -0.36
CiitaP79621 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CiitaP79621 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
CiitaP79621 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CiitaP79621 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CiitaP79621 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CiitaP79621 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
CiitaP79621 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CiitaP79621 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
CiitaP79621 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CiitaP79621 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
CiitaP79621 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CiitaP79621 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
CiitaP79621 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CiitaP79621 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
CiitaP79621 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CiitaP79621 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
CiitaP79621 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.79□□□□□ -0.36
CiitaP79621 Gm43773-201ENSMUST00000198548 2162 ntBASIC12.79□□□□□ -0.36
CiitaP79621 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CiitaP79621 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
CiitaP79621 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CiitaP79621 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
CiitaP79621 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CiitaP79621 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CiitaP79621 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 80.4 ms