Protein–RNA interactions for Protein: P70298

Cux2, Homeobox protein cut-like 2, mousemouse

Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux2P70298 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cux2P70298 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Cux2P70298 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cux2P70298 Gm5740-201ENSMUST00000211003 1857 ntBASIC19.01■□□□□ 0.63
Cux2P70298 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cux2P70298 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Cux2P70298 Ppm1b-203ENSMUST00000112305 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cux2P70298 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cux2P70298 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cux2P70298 Ncmap-201ENSMUST00000064481 1448 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
Cux2P70298 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Cux2P70298 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cux2P70298 Nptn-202ENSMUST00000114121 863 ntTSL 5 BASIC19■□□□□ 0.63
Cux2P70298 Gm12470-201ENSMUST00000117239 1049 ntBASIC19■□□□□ 0.63
Cux2P70298 Gm6758-201ENSMUST00000119643 1055 ntBASIC19■□□□□ 0.63
Cux2P70298 Gm7211-201ENSMUST00000172692 1118 ntBASIC19■□□□□ 0.63
Cux2P70298 Prm2-202ENSMUST00000189593 674 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Cux2P70298 Gm43726-201ENSMUST00000199110 775 ntBASIC19■□□□□ 0.63
Cux2P70298 Mrpl23-207ENSMUST00000210803 590 ntTSL 3 BASIC19■□□□□ 0.63
Cux2P70298 AC159261.1-201ENSMUST00000222493 911 ntTSL 2 BASIC19■□□□□ 0.63
Cux2P70298 Prss1-201ENSMUST00000031910 805 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cux2P70298 Nt5dc1-202ENSMUST00000099973 761 ntTSL 1 (best) BASIC19■□□□□ 0.63
Cux2P70298 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cux2P70298 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC19■□□□□ 0.63
Cux2P70298 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cux2P70298 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Cux2P70298 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Cux2P70298 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cux2P70298 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cux2P70298 Gm26818-201ENSMUST00000181367 1360 ntTSL 1 (best) BASIC19■□□□□ 0.63
Cux2P70298 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cux2P70298 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC19■□□□□ 0.63
Cux2P70298 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC19■□□□□ 0.63
Cux2P70298 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC19■□□□□ 0.63
Cux2P70298 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cux2P70298 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cux2P70298 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cux2P70298 Acot6-202ENSMUST00000222921 3622 ntBASIC19■□□□□ 0.63
Cux2P70298 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC19■□□□□ 0.63
Cux2P70298 Gm20703-201ENSMUST00000175668 385 ntTSL 2 BASIC19■□□□□ 0.63
Cux2P70298 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC19■□□□□ 0.63
Cux2P70298 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC19■□□□□ 0.63
Cux2P70298 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC19■□□□□ 0.63
Cux2P70298 Gm43811-201ENSMUST00000202862 695 ntBASIC19■□□□□ 0.63
Cux2P70298 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Cux2P70298 Ghrl-205ENSMUST00000204163 447 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
Cux2P70298 Wbp1-209ENSMUST00000205023 716 ntBASIC19■□□□□ 0.63
Cux2P70298 Gm9644-201ENSMUST00000212828 1183 ntBASIC19■□□□□ 0.63
Cux2P70298 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC19■□□□□ 0.63
Cux2P70298 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cux2P70298 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Cux2P70298 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cux2P70298 Vmn1r38-201ENSMUST00000226457 3462 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Cux2P70298 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Cux2P70298 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cux2P70298 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Cux2P70298 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cux2P70298 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Cux2P70298 Gm44740-201ENSMUST00000205603 1614 ntBASIC18.99■□□□□ 0.63
Cux2P70298 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cux2P70298 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cux2P70298 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cux2P70298 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cux2P70298 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cux2P70298 Gm12009-201ENSMUST00000121361 1100 ntBASIC18.99■□□□□ 0.63
Cux2P70298 1500015A07Rik-202ENSMUST00000184530 423 ntTSL 3 BASIC18.99■□□□□ 0.63
Cux2P70298 Zcwpw2-203ENSMUST00000187803 372 ntBASIC18.99■□□□□ 0.63
Cux2P70298 Gm42689-201ENSMUST00000202403 404 ntBASIC18.99■□□□□ 0.63
Cux2P70298 3930402G23Rik-202ENSMUST00000208615 581 ntTSL 3 BASIC18.99■□□□□ 0.63
Cux2P70298 Map7-203ENSMUST00000213312 795 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Cux2P70298 Gm31557-201ENSMUST00000213825 973 ntTSL 5 BASIC18.99■□□□□ 0.63
Cux2P70298 Gm32872-201ENSMUST00000220037 205 ntTSL 3 BASIC18.99■□□□□ 0.63
Cux2P70298 Gm18065-201ENSMUST00000221395 526 ntBASIC18.99■□□□□ 0.63
Cux2P70298 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cux2P70298 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cux2P70298 Teddm3-201ENSMUST00000170665 1346 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Cux2P70298 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC18.98■□□□□ 0.63
Cux2P70298 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cux2P70298 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cux2P70298 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cux2P70298 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cux2P70298 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cux2P70298 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC18.98■□□□□ 0.63
Cux2P70298 Gm9915-201ENSMUST00000066196 1383 ntBASIC18.98■□□□□ 0.63
Cux2P70298 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cux2P70298 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cux2P70298 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC18.98■□□□□ 0.63
Cux2P70298 Gm5171-201ENSMUST00000214944 1415 ntBASIC18.98■□□□□ 0.63
Cux2P70298 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cux2P70298 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cux2P70298 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cux2P70298 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cux2P70298 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Cux2P70298 Gm44758-201ENSMUST00000206096 2068 ntBASIC18.98■□□□□ 0.63
Cux2P70298 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
Cux2P70298 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cux2P70298 Cdk1-202ENSMUST00000119827 1253 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Cux2P70298 Gm8659-201ENSMUST00000120024 1084 ntBASIC18.98■□□□□ 0.63
Cux2P70298 Gm11736-201ENSMUST00000121468 505 ntBASIC18.98■□□□□ 0.63
Cux2P70298 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms