Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC13.05□□□□□ -0.32
Hmgb1P63158 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Hmgb1P63158 Gm43984-201ENSMUST00000204572 2864 ntBASIC13.05□□□□□ -0.32
Hmgb1P63158 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Hmgb1P63158 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Hmgb1P63158 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Hmgb1P63158 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC13.05□□□□□ -0.32
Hmgb1P63158 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hmgb1P63158 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Hmgb1P63158 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Hmgb1P63158 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC13.04□□□□□ -0.32
Hmgb1P63158 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hmgb1P63158 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hmgb1P63158 Gm43589-201ENSMUST00000199400 1523 ntBASIC13.04□□□□□ -0.32
Hmgb1P63158 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Hmgb1P63158 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hmgb1P63158 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC13.04□□□□□ -0.32
Hmgb1P63158 Gm5847-201ENSMUST00000178959 1595 ntBASIC13.04□□□□□ -0.32
Hmgb1P63158 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Hmgb1P63158 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hmgb1P63158 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hmgb1P63158 Gm43339-201ENSMUST00000200032 1606 ntBASIC13.04□□□□□ -0.32
Hmgb1P63158 Gm23270-201ENSMUST00000104055 131 ntBASIC13.04□□□□□ -0.32
Hmgb1P63158 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC13.04□□□□□ -0.32
Hmgb1P63158 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC13.04□□□□□ -0.32
Hmgb1P63158 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC13.04□□□□□ -0.32
Hmgb1P63158 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Hmgb1P63158 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Hmgb1P63158 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
Hmgb1P63158 Gm5070-201ENSMUST00000177599 862 ntBASIC13.04□□□□□ -0.32
Hmgb1P63158 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC13.04□□□□□ -0.32
Hmgb1P63158 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC13.04□□□□□ -0.32
Hmgb1P63158 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hmgb1P63158 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC13.04□□□□□ -0.32
Hmgb1P63158 Gm9368-201ENSMUST00000219348 831 ntBASIC13.04□□□□□ -0.32
Hmgb1P63158 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hmgb1P63158 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hmgb1P63158 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hmgb1P63158 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC13.04□□□□□ -0.32
Hmgb1P63158 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC13.04□□□□□ -0.32
Hmgb1P63158 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC13.04□□□□□ -0.32
Hmgb1P63158 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Hmgb1P63158 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Hmgb1P63158 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
Hmgb1P63158 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Hmgb1P63158 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hmgb1P63158 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hmgb1P63158 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hmgb1P63158 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hmgb1P63158 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Hmgb1P63158 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hmgb1P63158 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hmgb1P63158 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hmgb1P63158 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hmgb1P63158 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC13.03□□□□□ -0.32
Hmgb1P63158 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Hmgb1P63158 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Hmgb1P63158 Gm3836-201ENSMUST00000211377 1613 ntBASIC13.03□□□□□ -0.32
Hmgb1P63158 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hmgb1P63158 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hmgb1P63158 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Hmgb1P63158 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Hmgb1P63158 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hmgb1P63158 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC13.03□□□□□ -0.32
Hmgb1P63158 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Hmgb1P63158 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC13.03□□□□□ -0.32
Hmgb1P63158 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hmgb1P63158 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC13.03□□□□□ -0.32
Hmgb1P63158 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hmgb1P63158 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Hmgb1P63158 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hmgb1P63158 Muc13-201ENSMUST00000023520 2942 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hmgb1P63158 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hmgb1P63158 AC091458.1-201ENSMUST00000220902 1361 ntBASIC13.03□□□□□ -0.32
Hmgb1P63158 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Hmgb1P63158 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Hmgb1P63158 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Hmgb1P63158 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hmgb1P63158 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hmgb1P63158 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC13.03□□□□□ -0.32
Hmgb1P63158 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hmgb1P63158 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Hmgb1P63158 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hmgb1P63158 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Hmgb1P63158 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Hmgb1P63158 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hmgb1P63158 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Hmgb1P63158 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Hmgb1P63158 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hmgb1P63158 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Hmgb1P63158 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Hmgb1P63158 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Hmgb1P63158 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Hmgb1P63158 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Hmgb1P63158 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Hmgb1P63158 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Hmgb1P63158 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Hmgb1P63158 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Hmgb1P63158 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Hmgb1P63158 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms