Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Crnkl1P63154 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Crnkl1P63154 Gm15897-201ENSMUST00000117770 1486 ntBASIC11.7□□□□□ -0.54
Crnkl1P63154 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Crnkl1P63154 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Crnkl1P63154 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Crnkl1P63154 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Crnkl1P63154 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Crnkl1P63154 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Crnkl1P63154 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Crnkl1P63154 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Crnkl1P63154 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Crnkl1P63154 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Crnkl1P63154 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Crnkl1P63154 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Crnkl1P63154 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Crnkl1P63154 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Crnkl1P63154 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Crnkl1P63154 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC11.7□□□□□ -0.54
Crnkl1P63154 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC11.7□□□□□ -0.54
Crnkl1P63154 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC11.7□□□□□ -0.54
Crnkl1P63154 AC140451.2-201ENSMUST00000228030 664 ntBASIC11.7□□□□□ -0.54
Crnkl1P63154 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Crnkl1P63154 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Crnkl1P63154 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Crnkl1P63154 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Crnkl1P63154 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC11.7□□□□□ -0.54
Crnkl1P63154 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC11.7□□□□□ -0.54
Crnkl1P63154 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Crnkl1P63154 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Crnkl1P63154 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Crnkl1P63154 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Crnkl1P63154 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC11.7□□□□□ -0.54
Crnkl1P63154 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Crnkl1P63154 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Crnkl1P63154 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Crnkl1P63154 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Crnkl1P63154 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Crnkl1P63154 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Crnkl1P63154 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Crnkl1P63154 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Crnkl1P63154 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Crnkl1P63154 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Crnkl1P63154 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Crnkl1P63154 Dctn4-202ENSMUST00000223590 1530 ntBASIC11.7□□□□□ -0.54
Crnkl1P63154 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Crnkl1P63154 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Crnkl1P63154 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC11.7□□□□□ -0.54
Crnkl1P63154 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Crnkl1P63154 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Crnkl1P63154 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Crnkl1P63154 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Crnkl1P63154 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC11.7□□□□□ -0.54
Crnkl1P63154 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC11.69□□□□□ -0.54
Crnkl1P63154 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Crnkl1P63154 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Crnkl1P63154 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Crnkl1P63154 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Crnkl1P63154 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC11.69□□□□□ -0.54
Crnkl1P63154 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Crnkl1P63154 Gm37954-201ENSMUST00000195400 2071 ntBASIC11.69□□□□□ -0.54
Crnkl1P63154 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Crnkl1P63154 Gm38157-201ENSMUST00000194178 1698 ntBASIC11.69□□□□□ -0.54
Crnkl1P63154 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Crnkl1P63154 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Crnkl1P63154 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Crnkl1P63154 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Crnkl1P63154 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Crnkl1P63154 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Crnkl1P63154 Gm12957-201ENSMUST00000117835 377 ntBASIC11.69□□□□□ -0.54
Crnkl1P63154 Gm14704-201ENSMUST00000120300 874 ntBASIC11.69□□□□□ -0.54
Crnkl1P63154 Gm5863-201ENSMUST00000121760 1008 ntBASIC11.69□□□□□ -0.54
Crnkl1P63154 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Crnkl1P63154 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Crnkl1P63154 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC11.69□□□□□ -0.54
Crnkl1P63154 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Crnkl1P63154 Gm16296-201ENSMUST00000159905 325 ntBASIC11.69□□□□□ -0.54
Crnkl1P63154 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Crnkl1P63154 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Crnkl1P63154 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC11.69□□□□□ -0.54
Crnkl1P63154 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC11.69□□□□□ -0.54
Crnkl1P63154 Gm19163-201ENSMUST00000223313 780 ntBASIC11.69□□□□□ -0.54
Crnkl1P63154 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Crnkl1P63154 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Crnkl1P63154 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Crnkl1P63154 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Crnkl1P63154 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Crnkl1P63154 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Crnkl1P63154 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Crnkl1P63154 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Crnkl1P63154 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Crnkl1P63154 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Crnkl1P63154 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Crnkl1P63154 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
Crnkl1P63154 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC11.69□□□□□ -0.54
Crnkl1P63154 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Crnkl1P63154 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Crnkl1P63154 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Crnkl1P63154 Gm9200-201ENSMUST00000118513 1354 ntBASIC11.68□□□□□ -0.54
Crnkl1P63154 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms