Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ybx1P62960 Gm38151-201ENSMUST00000195085 289 ntBASIC12.12□□□□□ -0.47
Ybx1P62960 Gm42518-201ENSMUST00000196277 938 ntBASIC12.12□□□□□ -0.47
Ybx1P62960 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC12.12□□□□□ -0.47
Ybx1P62960 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC12.12□□□□□ -0.47
Ybx1P62960 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Ybx1P62960 AC112945.1-201ENSMUST00000226413 514 ntBASIC12.12□□□□□ -0.47
Ybx1P62960 AC122350.1-201ENSMUST00000228135 533 ntBASIC12.12□□□□□ -0.47
Ybx1P62960 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ybx1P62960 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Ybx1P62960 Gm5879-201ENSMUST00000089501 1209 ntBASIC12.12□□□□□ -0.47
Ybx1P62960 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ybx1P62960 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ybx1P62960 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ybx1P62960 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Ybx1P62960 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ybx1P62960 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Ybx1P62960 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ybx1P62960 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ybx1P62960 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ybx1P62960 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ybx1P62960 Map1b-203ENSMUST00000223725 2669 ntBASIC12.12□□□□□ -0.47
Ybx1P62960 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ybx1P62960 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.12□□□□□ -0.47
Ybx1P62960 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.12□□□□□ -0.47
Ybx1P62960 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ybx1P62960 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ybx1P62960 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC12.11□□□□□ -0.47
Ybx1P62960 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ybx1P62960 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Ybx1P62960 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ybx1P62960 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ybx1P62960 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ybx1P62960 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC12.11□□□□□ -0.47
Ybx1P62960 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Ybx1P62960 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC12.11□□□□□ -0.47
Ybx1P62960 Gm5053-201ENSMUST00000208361 1678 ntBASIC12.11□□□□□ -0.47
Ybx1P62960 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ybx1P62960 Gm11340-201ENSMUST00000119226 412 ntBASIC12.11□□□□□ -0.47
Ybx1P62960 Gm13668-201ENSMUST00000119237 1001 ntBASIC12.11□□□□□ -0.47
Ybx1P62960 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC12.11□□□□□ -0.47
Ybx1P62960 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ybx1P62960 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC12.11□□□□□ -0.47
Ybx1P62960 Gm8531-201ENSMUST00000188319 893 ntBASIC12.11□□□□□ -0.47
Ybx1P62960 Gm17877-201ENSMUST00000192578 814 ntBASIC12.11□□□□□ -0.47
Ybx1P62960 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC12.11□□□□□ -0.47
Ybx1P62960 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC12.11□□□□□ -0.47
Ybx1P62960 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC12.11□□□□□ -0.47
Ybx1P62960 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ybx1P62960 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Ybx1P62960 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ybx1P62960 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Ybx1P62960 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ybx1P62960 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ybx1P62960 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ybx1P62960 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Ybx1P62960 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ybx1P62960 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ybx1P62960 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Ybx1P62960 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ybx1P62960 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ybx1P62960 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ybx1P62960 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ybx1P62960 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ybx1P62960 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ybx1P62960 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ybx1P62960 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.11□□□□□ -0.47
Ybx1P62960 Gm9796-201ENSMUST00000062249 2250 ntBASIC12.11□□□□□ -0.47
Ybx1P62960 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ybx1P62960 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ybx1P62960 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ybx1P62960 Gm18983-201ENSMUST00000222884 2729 ntBASIC12.1□□□□□ -0.47
Ybx1P62960 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC12.1□□□□□ -0.47
Ybx1P62960 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ybx1P62960 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ybx1P62960 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ybx1P62960 Gm44806-201ENSMUST00000205574 2303 ntBASIC12.1□□□□□ -0.47
Ybx1P62960 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ybx1P62960 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Ybx1P62960 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ybx1P62960 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ybx1P62960 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ybx1P62960 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ybx1P62960 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ybx1P62960 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Ybx1P62960 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC12.1□□□□□ -0.47
Ybx1P62960 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC12.1□□□□□ -0.47
Ybx1P62960 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC12.1□□□□□ -0.47
Ybx1P62960 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC12.1□□□□□ -0.47
Ybx1P62960 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ybx1P62960 Gm6771-201ENSMUST00000182716 1001 ntBASIC12.1□□□□□ -0.47
Ybx1P62960 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC12.1□□□□□ -0.47
Ybx1P62960 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC12.1□□□□□ -0.47
Ybx1P62960 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Ybx1P62960 Gm8342-201ENSMUST00000209839 757 ntBASIC12.1□□□□□ -0.47
Ybx1P62960 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
Ybx1P62960 AC154257.1-202ENSMUST00000224729 843 ntBASIC12.1□□□□□ -0.47
Ybx1P62960 AC102368.1-201ENSMUST00000227161 892 ntBASIC12.1□□□□□ -0.47
Ybx1P62960 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Ybx1P62960 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms