Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Rrp1P56183 Gm11989-201ENSMUST00000117240 672 ntBASIC13.31□□□□□ -0.28
Rrp1P56183 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Rrp1P56183 Gm11362-201ENSMUST00000118838 850 ntBASIC13.31□□□□□ -0.28
Rrp1P56183 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC13.31□□□□□ -0.28
Rrp1P56183 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC13.31□□□□□ -0.28
Rrp1P56183 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC13.31□□□□□ -0.28
Rrp1P56183 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Rrp1P56183 AC166344.1-202ENSMUST00000224139 234 ntBASIC13.31□□□□□ -0.28
Rrp1P56183 Morn2-202ENSMUST00000227729 656 ntBASIC13.31□□□□□ -0.28
Rrp1P56183 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Rrp1P56183 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rrp1P56183 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rrp1P56183 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC13.31□□□□□ -0.28
Rrp1P56183 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC13.31□□□□□ -0.28
Rrp1P56183 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rrp1P56183 AC154537.1-201ENSMUST00000226101 1304 ntBASIC13.31□□□□□ -0.28
Rrp1P56183 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Rrp1P56183 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rrp1P56183 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rrp1P56183 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC13.31□□□□□ -0.28
Rrp1P56183 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC13.31□□□□□ -0.28
Rrp1P56183 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rrp1P56183 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rrp1P56183 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rrp1P56183 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Rrp1P56183 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rrp1P56183 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Rrp1P56183 Gm36940-201ENSMUST00000194281 2036 ntBASIC13.3□□□□□ -0.28
Rrp1P56183 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rrp1P56183 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Rrp1P56183 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rrp1P56183 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rrp1P56183 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rrp1P56183 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC13.3□□□□□ -0.28
Rrp1P56183 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rrp1P56183 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
Rrp1P56183 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC13.3□□□□□ -0.28
Rrp1P56183 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rrp1P56183 Gm9230-201ENSMUST00000188228 532 ntBASIC13.3□□□□□ -0.28
Rrp1P56183 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC13.3□□□□□ -0.28
Rrp1P56183 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rrp1P56183 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rrp1P56183 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC13.3□□□□□ -0.28
Rrp1P56183 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rrp1P56183 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rrp1P56183 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rrp1P56183 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rrp1P56183 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rrp1P56183 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rrp1P56183 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rrp1P56183 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rrp1P56183 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rrp1P56183 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rrp1P56183 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rrp1P56183 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rrp1P56183 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rrp1P56183 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rrp1P56183 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rrp1P56183 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC13.29□□□□□ -0.28
Rrp1P56183 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC13.29□□□□□ -0.28
Rrp1P56183 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rrp1P56183 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rrp1P56183 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC13.29□□□□□ -0.28
Rrp1P56183 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rrp1P56183 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rrp1P56183 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rrp1P56183 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rrp1P56183 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rrp1P56183 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC13.29□□□□□ -0.28
Rrp1P56183 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rrp1P56183 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rrp1P56183 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC13.29□□□□□ -0.28
Rrp1P56183 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rrp1P56183 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rrp1P56183 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC13.29□□□□□ -0.28
Rrp1P56183 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Rrp1P56183 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC13.29□□□□□ -0.28
Rrp1P56183 Gm19309-201ENSMUST00000218295 205 ntBASIC13.29□□□□□ -0.28
Rrp1P56183 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rrp1P56183 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rrp1P56183 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rrp1P56183 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rrp1P56183 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rrp1P56183 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rrp1P56183 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rrp1P56183 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Rrp1P56183 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rrp1P56183 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rrp1P56183 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rrp1P56183 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC13.29□□□□□ -0.28
Rrp1P56183 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rrp1P56183 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rrp1P56183 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Rrp1P56183 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Rrp1P56183 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Rrp1P56183 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rrp1P56183 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rrp1P56183 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rrp1P56183 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms