Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cdkn2bP55271 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cdkn2bP55271 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cdkn2bP55271 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Cdkn2bP55271 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cdkn2bP55271 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cdkn2bP55271 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cdkn2bP55271 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cdkn2bP55271 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC11.28□□□□□ -0.6
Cdkn2bP55271 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Cdkn2bP55271 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cdkn2bP55271 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Cdkn2bP55271 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cdkn2bP55271 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cdkn2bP55271 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC11.28□□□□□ -0.6
Cdkn2bP55271 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC11.28□□□□□ -0.6
Cdkn2bP55271 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Cdkn2bP55271 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC11.28□□□□□ -0.6
Cdkn2bP55271 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC11.28□□□□□ -0.6
Cdkn2bP55271 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Cdkn2bP55271 Gm4607-201ENSMUST00000206649 577 ntBASIC11.28□□□□□ -0.6
Cdkn2bP55271 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC11.28□□□□□ -0.6
Cdkn2bP55271 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cdkn2bP55271 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC11.28□□□□□ -0.6
Cdkn2bP55271 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cdkn2bP55271 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Cdkn2bP55271 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cdkn2bP55271 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cdkn2bP55271 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cdkn2bP55271 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cdkn2bP55271 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cdkn2bP55271 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cdkn2bP55271 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cdkn2bP55271 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Cdkn2bP55271 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cdkn2bP55271 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cdkn2bP55271 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cdkn2bP55271 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cdkn2bP55271 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cdkn2bP55271 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cdkn2bP55271 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cdkn2bP55271 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Cdkn2bP55271 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Cdkn2bP55271 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Cdkn2bP55271 AC171277.1-201ENSMUST00000216902 1441 ntBASIC11.27□□□□□ -0.6
Cdkn2bP55271 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Cdkn2bP55271 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Cdkn2bP55271 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Cdkn2bP55271 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Cdkn2bP55271 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Cdkn2bP55271 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC11.27□□□□□ -0.6
Cdkn2bP55271 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cdkn2bP55271 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cdkn2bP55271 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
Cdkn2bP55271 Gm38292-201ENSMUST00000192646 3045 ntBASIC11.27□□□□□ -0.61
Cdkn2bP55271 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cdkn2bP55271 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Cdkn2bP55271 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Cdkn2bP55271 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
Cdkn2bP55271 Gm11424-201ENSMUST00000121929 829 ntBASIC11.27□□□□□ -0.61
Cdkn2bP55271 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Cdkn2bP55271 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Cdkn2bP55271 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC11.27□□□□□ -0.61
Cdkn2bP55271 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC11.27□□□□□ -0.61
Cdkn2bP55271 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC11.27□□□□□ -0.61
Cdkn2bP55271 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC11.27□□□□□ -0.61
Cdkn2bP55271 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Cdkn2bP55271 Gm8956-201ENSMUST00000203939 825 ntBASIC11.27□□□□□ -0.61
Cdkn2bP55271 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cdkn2bP55271 AC153954.1-201ENSMUST00000216959 255 ntBASIC11.27□□□□□ -0.61
Cdkn2bP55271 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC11.27□□□□□ -0.61
Cdkn2bP55271 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC11.27□□□□□ -0.61
Cdkn2bP55271 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cdkn2bP55271 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cdkn2bP55271 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cdkn2bP55271 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cdkn2bP55271 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Cdkn2bP55271 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC11.27□□□□□ -0.61
Cdkn2bP55271 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Cdkn2bP55271 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC11.27□□□□□ -0.61
Cdkn2bP55271 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
Cdkn2bP55271 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cdkn2bP55271 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC11.27□□□□□ -0.61
Cdkn2bP55271 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Cdkn2bP55271 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cdkn2bP55271 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cdkn2bP55271 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
Cdkn2bP55271 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Cdkn2bP55271 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cdkn2bP55271 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cdkn2bP55271 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cdkn2bP55271 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC11.27□□□□□ -0.61
Cdkn2bP55271 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cdkn2bP55271 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cdkn2bP55271 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cdkn2bP55271 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cdkn2bP55271 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cdkn2bP55271 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Cdkn2bP55271 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cdkn2bP55271 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 75.2 ms