Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Sox1P53783 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox1P53783 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox1P53783 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sox1P53783 Gm23595-201ENSMUST00000104306 130 ntBASIC12.1□□□□□ -0.47
Sox1P53783 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC12.1□□□□□ -0.47
Sox1P53783 Mid1-ps1-201ENSMUST00000167967 1248 ntBASIC12.1□□□□□ -0.47
Sox1P53783 Gm28342-201ENSMUST00000190308 589 ntTSL 3 BASIC12.1□□□□□ -0.47
Sox1P53783 Ckb-ps2-201ENSMUST00000198886 1001 ntBASIC12.1□□□□□ -0.47
Sox1P53783 Gm30055-201ENSMUST00000203175 803 ntBASIC12.1□□□□□ -0.47
Sox1P53783 Gm44044-201ENSMUST00000205178 1089 ntBASIC12.1□□□□□ -0.47
Sox1P53783 Gm7183-201ENSMUST00000213870 1005 ntBASIC12.1□□□□□ -0.47
Sox1P53783 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sox1P53783 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox1P53783 Lsm3-201ENSMUST00000040607 743 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox1P53783 Olfr435-201ENSMUST00000058118 942 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Sox1P53783 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox1P53783 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
Sox1P53783 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Sox1P53783 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Sox1P53783 Trim34b-202ENSMUST00000180136 1535 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Sox1P53783 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox1P53783 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox1P53783 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.1□□□□□ -0.47
Sox1P53783 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox1P53783 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox1P53783 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sox1P53783 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
Sox1P53783 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox1P53783 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox1P53783 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox1P53783 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Sox1P53783 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC12.1□□□□□ -0.47
Sox1P53783 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sox1P53783 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Sox1P53783 Etv1-204ENSMUST00000160701 1578 ntTSL 5 BASIC12.09□□□□□ -0.47
Sox1P53783 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Sox1P53783 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Sox1P53783 Ptpn2-202ENSMUST00000120934 1497 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Sox1P53783 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox1P53783 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox1P53783 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox1P53783 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.09□□□□□ -0.47
Sox1P53783 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox1P53783 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox1P53783 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Sox1P53783 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Sox1P53783 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox1P53783 Gm23745-201ENSMUST00000104230 125 ntBASIC12.09□□□□□ -0.47
Sox1P53783 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC12.09□□□□□ -0.47
Sox1P53783 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC12.09□□□□□ -0.47
Sox1P53783 Gm24294-201ENSMUST00000158295 277 ntBASIC12.09□□□□□ -0.47
Sox1P53783 Gm8459-201ENSMUST00000162504 760 ntBASIC12.09□□□□□ -0.47
Sox1P53783 Tex29-204ENSMUST00000166638 561 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Sox1P53783 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sox1P53783 Gm19015-201ENSMUST00000184002 1189 ntBASIC12.09□□□□□ -0.47
Sox1P53783 Cryab-205ENSMUST00000216755 836 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox1P53783 Tmsb15b2-201ENSMUST00000069803 450 ntTSL 2 BASIC12.09□□□□□ -0.47
Sox1P53783 Rps8-ps4-201ENSMUST00000092523 612 ntBASIC12.09□□□□□ -0.47
Sox1P53783 Aven-202ENSMUST00000099588 791 ntAPPRIS ALT2 TSL 3 BASIC12.09□□□□□ -0.47
Sox1P53783 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sox1P53783 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox1P53783 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox1P53783 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Sox1P53783 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Sox1P53783 Gm44065-201ENSMUST00000203184 3527 ntBASIC12.09□□□□□ -0.47
Sox1P53783 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox1P53783 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sox1P53783 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sox1P53783 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox1P53783 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Sox1P53783 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Sox1P53783 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sox1P53783 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Sox1P53783 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Sox1P53783 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Sox1P53783 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Sox1P53783 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sox1P53783 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sox1P53783 Gm43807-201ENSMUST00000200678 1781 ntBASIC12.08□□□□□ -0.48
Sox1P53783 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Sox1P53783 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sox1P53783 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sox1P53783 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sox1P53783 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sox1P53783 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sox1P53783 Gm23062-201ENSMUST00000102349 110 ntBASIC12.08□□□□□ -0.48
Sox1P53783 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sox1P53783 0610037L13Rik-206ENSMUST00000120473 835 ntTSL 2 BASIC12.08□□□□□ -0.48
Sox1P53783 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sox1P53783 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
Sox1P53783 Pid1-205ENSMUST00000176720 450 ntTSL 5 BASIC12.08□□□□□ -0.48
Sox1P53783 Gm27211-201ENSMUST00000183507 631 ntTSL 5 BASIC12.08□□□□□ -0.48
Sox1P53783 Gsdmcl2-202ENSMUST00000185391 796 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sox1P53783 Gm28415-201ENSMUST00000187528 452 ntTSL 2 BASIC12.08□□□□□ -0.48
Sox1P53783 5033404E19Rik-202ENSMUST00000194748 1065 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sox1P53783 Zfp655-204ENSMUST00000199003 601 ntTSL 2 BASIC12.08□□□□□ -0.48
Sox1P53783 1810059H22Rik-207ENSMUST00000204809 289 ntTSL 3 BASIC12.08□□□□□ -0.48
Sox1P53783 Mylpf-206ENSMUST00000206772 653 ntTSL 3 BASIC12.08□□□□□ -0.48
Sox1P53783 CT010480.2-201ENSMUST00000225424 737 ntBASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms