Protein–RNA interactions for Protein: P51448

Rora, Nuclear receptor ROR-alpha, mousemouse

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RoraP51448 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
RoraP51448 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RoraP51448 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RoraP51448 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RoraP51448 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
RoraP51448 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
RoraP51448 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RoraP51448 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
RoraP51448 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
RoraP51448 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
RoraP51448 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RoraP51448 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
RoraP51448 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RoraP51448 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
RoraP51448 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
RoraP51448 Gm15004-201ENSMUST00000119192 630 ntBASIC11.23□□□□□ -0.61
RoraP51448 Gm13461-201ENSMUST00000120980 662 ntBASIC11.23□□□□□ -0.61
RoraP51448 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RoraP51448 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
RoraP51448 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC11.23□□□□□ -0.61
RoraP51448 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RoraP51448 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
RoraP51448 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC11.23□□□□□ -0.61
RoraP51448 Gm28686-201ENSMUST00000187404 609 ntBASIC11.23□□□□□ -0.61
RoraP51448 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC11.23□□□□□ -0.61
RoraP51448 Gm37835-201ENSMUST00000193305 361 ntBASIC11.23□□□□□ -0.61
RoraP51448 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC11.23□□□□□ -0.61
RoraP51448 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC11.23□□□□□ -0.61
RoraP51448 Gm42599-201ENSMUST00000201308 469 ntBASIC11.23□□□□□ -0.61
RoraP51448 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC11.23□□□□□ -0.61
RoraP51448 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RoraP51448 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
RoraP51448 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
RoraP51448 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC11.23□□□□□ -0.61
RoraP51448 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC11.23□□□□□ -0.61
RoraP51448 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
RoraP51448 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
RoraP51448 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RoraP51448 AC091458.1-201ENSMUST00000220902 1361 ntBASIC11.23□□□□□ -0.61
RoraP51448 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
RoraP51448 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
RoraP51448 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
RoraP51448 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC11.23□□□□□ -0.61
RoraP51448 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RoraP51448 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RoraP51448 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RoraP51448 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
RoraP51448 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RoraP51448 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RoraP51448 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RoraP51448 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RoraP51448 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
RoraP51448 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RoraP51448 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RoraP51448 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RoraP51448 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
RoraP51448 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
RoraP51448 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
RoraP51448 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC11.22□□□□□ -0.61
RoraP51448 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
RoraP51448 Map1b-203ENSMUST00000223725 2669 ntBASIC11.22□□□□□ -0.61
RoraP51448 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
RoraP51448 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
RoraP51448 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
RoraP51448 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
RoraP51448 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
RoraP51448 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
RoraP51448 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
RoraP51448 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
RoraP51448 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC11.22□□□□□ -0.61
RoraP51448 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC11.22□□□□□ -0.61
RoraP51448 Gm11663-201ENSMUST00000117888 290 ntBASIC11.22□□□□□ -0.61
RoraP51448 Gm13809-201ENSMUST00000117921 597 ntBASIC11.22□□□□□ -0.61
RoraP51448 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC11.22□□□□□ -0.61
RoraP51448 Gm11660-201ENSMUST00000120955 412 ntBASIC11.22□□□□□ -0.61
RoraP51448 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC11.22□□□□□ -0.61
RoraP51448 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
RoraP51448 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC11.22□□□□□ -0.61
RoraP51448 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
RoraP51448 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC11.22□□□□□ -0.61
RoraP51448 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
RoraP51448 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
RoraP51448 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
RoraP51448 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC11.22□□□□□ -0.61
RoraP51448 Gm27177-202ENSMUST00000183514 2703 ntBASIC11.22□□□□□ -0.61
RoraP51448 Gm7467-201ENSMUST00000185173 652 ntBASIC11.22□□□□□ -0.61
RoraP51448 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
RoraP51448 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
RoraP51448 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC11.22□□□□□ -0.61
RoraP51448 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC11.22□□□□□ -0.61
RoraP51448 AC125486.1-201ENSMUST00000218701 320 ntBASIC11.22□□□□□ -0.61
RoraP51448 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
RoraP51448 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
RoraP51448 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
RoraP51448 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
RoraP51448 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
RoraP51448 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
RoraP51448 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
RoraP51448 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
RoraP51448 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms