Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfsf4P43488 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC11.39□□□□□ -0.59
Tnfsf4P43488 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfsf4P43488 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC11.39□□□□□ -0.59
Tnfsf4P43488 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Tnfsf4P43488 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
Tnfsf4P43488 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfsf4P43488 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Tnfsf4P43488 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Tnfsf4P43488 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC11.39□□□□□ -0.59
Tnfsf4P43488 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfsf4P43488 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfsf4P43488 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC11.39□□□□□ -0.59
Tnfsf4P43488 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfsf4P43488 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC11.39□□□□□ -0.59
Tnfsf4P43488 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfsf4P43488 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfsf4P43488 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfsf4P43488 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfsf4P43488 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Tnfsf4P43488 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfsf4P43488 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfsf4P43488 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Tnfsf4P43488 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC11.38□□□□□ -0.59
Tnfsf4P43488 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Tnfsf4P43488 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tnfsf4P43488 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tnfsf4P43488 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tnfsf4P43488 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Tnfsf4P43488 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Tnfsf4P43488 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tnfsf4P43488 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tnfsf4P43488 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tnfsf4P43488 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tnfsf4P43488 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC11.38□□□□□ -0.59
Tnfsf4P43488 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tnfsf4P43488 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Tnfsf4P43488 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tnfsf4P43488 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Tnfsf4P43488 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Tnfsf4P43488 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
Tnfsf4P43488 Gm12015-201ENSMUST00000117065 843 ntBASIC11.38□□□□□ -0.59
Tnfsf4P43488 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Tnfsf4P43488 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Tnfsf4P43488 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Tnfsf4P43488 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC11.38□□□□□ -0.59
Tnfsf4P43488 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Tnfsf4P43488 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tnfsf4P43488 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC11.38□□□□□ -0.59
Tnfsf4P43488 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Tnfsf4P43488 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Tnfsf4P43488 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC11.38□□□□□ -0.59
Tnfsf4P43488 Gm37424-201ENSMUST00000191727 561 ntBASIC11.38□□□□□ -0.59
Tnfsf4P43488 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tnfsf4P43488 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tnfsf4P43488 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tnfsf4P43488 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tnfsf4P43488 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Tnfsf4P43488 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Tnfsf4P43488 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tnfsf4P43488 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tnfsf4P43488 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tnfsf4P43488 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tnfsf4P43488 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Tnfsf4P43488 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tnfsf4P43488 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Tnfsf4P43488 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Tnfsf4P43488 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC11.37□□□□□ -0.59
Tnfsf4P43488 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tnfsf4P43488 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tnfsf4P43488 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tnfsf4P43488 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Tnfsf4P43488 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tnfsf4P43488 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Tnfsf4P43488 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tnfsf4P43488 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tnfsf4P43488 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC11.37□□□□□ -0.59
Tnfsf4P43488 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC11.37□□□□□ -0.59
Tnfsf4P43488 Gm15370-201ENSMUST00000117158 253 ntBASIC11.37□□□□□ -0.59
Tnfsf4P43488 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Tnfsf4P43488 Gm11960-201ENSMUST00000122068 925 ntBASIC11.37□□□□□ -0.59
Tnfsf4P43488 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Tnfsf4P43488 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC11.37□□□□□ -0.59
Tnfsf4P43488 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC11.37□□□□□ -0.59
Tnfsf4P43488 Gm38314-201ENSMUST00000195709 625 ntBASIC11.37□□□□□ -0.59
Tnfsf4P43488 Gm30285-201ENSMUST00000214614 422 ntBASIC11.37□□□□□ -0.59
Tnfsf4P43488 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tnfsf4P43488 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Tnfsf4P43488 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tnfsf4P43488 Gm9823-201ENSMUST00000051212 327 ntBASIC11.37□□□□□ -0.59
Tnfsf4P43488 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tnfsf4P43488 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC11.37□□□□□ -0.59
Tnfsf4P43488 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tnfsf4P43488 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC11.37□□□□□ -0.59
Tnfsf4P43488 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Tnfsf4P43488 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Tnfsf4P43488 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tnfsf4P43488 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Tnfsf4P43488 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tnfsf4P43488 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms