Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm5278-201ENSMUST00000055957 552 ntBASIC12.17□□□□□ -0.46
HttP42859 Gm8730-201ENSMUST00000076373 954 ntBASIC12.17□□□□□ -0.46
HttP42859 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
HttP42859 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
HttP42859 Gm9244-201ENSMUST00000056767 2129 ntBASIC12.16□□□□□ -0.46
HttP42859 4930593A02Rik-201ENSMUST00000181694 1437 ntTSL 5 BASIC12.16□□□□□ -0.46
HttP42859 Gm42499-201ENSMUST00000196193 1412 ntBASIC12.16□□□□□ -0.46
HttP42859 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
HttP42859 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC12.16□□□□□ -0.46
HttP42859 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
HttP42859 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
HttP42859 Gm20610-201ENSMUST00000176406 587 ntTSL 5 BASIC12.16□□□□□ -0.46
HttP42859 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC12.16□□□□□ -0.46
HttP42859 Tnfrsf14-205ENSMUST00000219534 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
HttP42859 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
HttP42859 Gm9531-201ENSMUST00000055820 638 ntTSL 3 BASIC12.16□□□□□ -0.46
HttP42859 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HttP42859 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HttP42859 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HttP42859 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
HttP42859 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HttP42859 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HttP42859 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HttP42859 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
HttP42859 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
HttP42859 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
HttP42859 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HttP42859 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
HttP42859 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12.16□□□□□ -0.46
HttP42859 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
HttP42859 Gm37160-201ENSMUST00000193081 1689 ntBASIC12.16□□□□□ -0.46
HttP42859 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
HttP42859 Snx10-202ENSMUST00000114439 968 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HttP42859 Gm5526-201ENSMUST00000153604 423 ntBASIC12.16□□□□□ -0.46
HttP42859 Gm16280-201ENSMUST00000162458 623 ntTSL 3 BASIC12.16□□□□□ -0.46
HttP42859 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
HttP42859 Ighv5-12-4-201ENSMUST00000195381 353 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
HttP42859 1110034G24Rik-201ENSMUST00000061891 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HttP42859 Tex45-201ENSMUST00000047265 1613 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
HttP42859 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
HttP42859 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HttP42859 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
HttP42859 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
HttP42859 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
HttP42859 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
HttP42859 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HttP42859 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC12.16□□□□□ -0.46
HttP42859 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC12.16□□□□□ -0.46
HttP42859 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
HttP42859 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
HttP42859 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
HttP42859 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
HttP42859 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
HttP42859 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC12.15□□□□□ -0.46
HttP42859 Gm29651-201ENSMUST00000189088 697 ntBASIC12.15□□□□□ -0.46
HttP42859 Fam186a-201ENSMUST00000062631 759 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
HttP42859 AY761184-201ENSMUST00000071886 503 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
HttP42859 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
HttP42859 Sdcbp-204ENSMUST00000108374 1803 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
HttP42859 Tekt2-202ENSMUST00000102616 1542 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
HttP42859 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
HttP42859 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
HttP42859 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
HttP42859 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
HttP42859 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
HttP42859 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
HttP42859 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
HttP42859 Adam20-201ENSMUST00000056331 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
HttP42859 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
HttP42859 Ccr6-205ENSMUST00000177568 1334 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
HttP42859 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
HttP42859 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
HttP42859 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
HttP42859 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
HttP42859 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
HttP42859 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
HttP42859 Gm37858-201ENSMUST00000192759 1231 ntBASIC12.15□□□□□ -0.46
HttP42859 Gm32102-201ENSMUST00000196885 241 ntBASIC12.15□□□□□ -0.46
HttP42859 Nudc-ps1-201ENSMUST00000209275 551 ntBASIC12.15□□□□□ -0.46
HttP42859 Gm18164-201ENSMUST00000213769 927 ntBASIC12.15□□□□□ -0.46
HttP42859 Gm18166-201ENSMUST00000215557 927 ntBASIC12.15□□□□□ -0.46
HttP42859 AC122891.1-201ENSMUST00000218671 268 ntBASIC12.15□□□□□ -0.46
HttP42859 Olfr761-201ENSMUST00000049620 1029 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
HttP42859 Olfr127-201ENSMUST00000076331 1095 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
HttP42859 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
HttP42859 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
HttP42859 AC113282.5-201ENSMUST00000224330 1679 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
HttP42859 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
HttP42859 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
HttP42859 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
HttP42859 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
HttP42859 Ccdc42-202ENSMUST00000102612 785 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
HttP42859 Slirp-202ENSMUST00000160488 802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
HttP42859 Atp5e-201ENSMUST00000016396 421 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
HttP42859 Fam47e-205ENSMUST00000175974 1016 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
HttP42859 Gm31557-201ENSMUST00000213825 973 ntTSL 5 BASIC12.15□□□□□ -0.47
HttP42859 Gm22341-201ENSMUST00000083775 129 ntBASIC12.15□□□□□ -0.47
HttP42859 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
HttP42859 Erich3-203ENSMUST00000189969 3460 ntBASIC12.14□□□□□ -0.47
HttP42859 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms