Protein–RNA interactions for Protein: P40630

Tfam, Transcription factor A, mitochondrial, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TfamP40630 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC11.44□□□□□ -0.58
TfamP40630 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC11.44□□□□□ -0.58
TfamP40630 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC11.44□□□□□ -0.58
TfamP40630 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
TfamP40630 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC11.44□□□□□ -0.58
TfamP40630 Gm2991-201ENSMUST00000173338 480 ntBASIC11.44□□□□□ -0.58
TfamP40630 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC11.44□□□□□ -0.58
TfamP40630 Gm6621-201ENSMUST00000193251 772 ntBASIC11.44□□□□□ -0.58
TfamP40630 Gm31256-201ENSMUST00000194705 506 ntBASIC11.44□□□□□ -0.58
TfamP40630 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
TfamP40630 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC11.44□□□□□ -0.58
TfamP40630 AC153962.4-201ENSMUST00000217878 242 ntBASIC11.44□□□□□ -0.58
TfamP40630 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC11.44□□□□□ -0.58
TfamP40630 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
TfamP40630 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
TfamP40630 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
TfamP40630 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
TfamP40630 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
TfamP40630 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
TfamP40630 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
TfamP40630 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC11.44□□□□□ -0.58
TfamP40630 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
TfamP40630 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
TfamP40630 AC129931.1-201ENSMUST00000228865 1861 ntBASIC11.44□□□□□ -0.58
TfamP40630 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
TfamP40630 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
TfamP40630 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC11.43□□□□□ -0.58
TfamP40630 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC11.43□□□□□ -0.58
TfamP40630 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
TfamP40630 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
TfamP40630 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
TfamP40630 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
TfamP40630 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
TfamP40630 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC11.43□□□□□ -0.58
TfamP40630 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
TfamP40630 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
TfamP40630 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
TfamP40630 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
TfamP40630 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
TfamP40630 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
TfamP40630 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
TfamP40630 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
TfamP40630 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
TfamP40630 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
TfamP40630 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
TfamP40630 Gm11930-201ENSMUST00000117788 190 ntBASIC11.43□□□□□ -0.58
TfamP40630 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC11.43□□□□□ -0.58
TfamP40630 Gm14726-201ENSMUST00000120623 896 ntBASIC11.43□□□□□ -0.58
TfamP40630 Gm12201-201ENSMUST00000120657 1234 ntBASIC11.43□□□□□ -0.58
TfamP40630 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
TfamP40630 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC11.43□□□□□ -0.58
TfamP40630 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC11.43□□□□□ -0.58
TfamP40630 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC11.43□□□□□ -0.58
TfamP40630 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC11.43□□□□□ -0.58
TfamP40630 Gm5070-201ENSMUST00000177599 862 ntBASIC11.43□□□□□ -0.58
TfamP40630 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC11.43□□□□□ -0.58
TfamP40630 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
TfamP40630 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
TfamP40630 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC11.43□□□□□ -0.58
TfamP40630 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
TfamP40630 Gm9368-201ENSMUST00000219348 831 ntBASIC11.43□□□□□ -0.58
TfamP40630 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
TfamP40630 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
TfamP40630 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
TfamP40630 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC11.43□□□□□ -0.58
TfamP40630 Gm8146-201ENSMUST00000192106 1847 ntBASIC11.43□□□□□ -0.58
TfamP40630 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
TfamP40630 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC11.43□□□□□ -0.58
TfamP40630 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC11.43□□□□□ -0.58
TfamP40630 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC11.43□□□□□ -0.58
TfamP40630 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
TfamP40630 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
TfamP40630 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
TfamP40630 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
TfamP40630 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC11.43□□□□□ -0.58
TfamP40630 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
TfamP40630 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
TfamP40630 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
TfamP40630 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
TfamP40630 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC11.43□□□□□ -0.58
TfamP40630 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
TfamP40630 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
TfamP40630 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
TfamP40630 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
TfamP40630 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
TfamP40630 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC11.42□□□□□ -0.58
TfamP40630 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
TfamP40630 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
TfamP40630 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC11.42□□□□□ -0.58
TfamP40630 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
TfamP40630 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
TfamP40630 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
TfamP40630 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
TfamP40630 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
TfamP40630 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
TfamP40630 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
TfamP40630 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
TfamP40630 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
TfamP40630 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC11.42□□□□□ -0.58
TfamP40630 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms