Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Usp4P35123 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Usp4P35123 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Usp4P35123 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Usp4P35123 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC12.39□□□□□ -0.43
Usp4P35123 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
Usp4P35123 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Usp4P35123 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Usp4P35123 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Usp4P35123 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Usp4P35123 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Usp4P35123 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Usp4P35123 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Usp4P35123 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Usp4P35123 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Usp4P35123 Gm9796-201ENSMUST00000062249 2250 ntBASIC12.39□□□□□ -0.43
Usp4P35123 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Usp4P35123 Gm43242-201ENSMUST00000199507 1776 ntBASIC12.39□□□□□ -0.43
Usp4P35123 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Usp4P35123 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Usp4P35123 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Usp4P35123 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Usp4P35123 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Usp4P35123 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Usp4P35123 Gm12502-201ENSMUST00000120197 444 ntBASIC12.39□□□□□ -0.43
Usp4P35123 Gm14726-201ENSMUST00000120623 896 ntBASIC12.39□□□□□ -0.43
Usp4P35123 Gm14247-201ENSMUST00000120950 237 ntBASIC12.39□□□□□ -0.43
Usp4P35123 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC12.39□□□□□ -0.43
Usp4P35123 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC12.39□□□□□ -0.43
Usp4P35123 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC12.39□□□□□ -0.43
Usp4P35123 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Usp4P35123 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Usp4P35123 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC12.39□□□□□ -0.43
Usp4P35123 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Usp4P35123 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC12.39□□□□□ -0.43
Usp4P35123 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC12.39□□□□□ -0.43
Usp4P35123 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Usp4P35123 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Usp4P35123 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Usp4P35123 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Usp4P35123 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Usp4P35123 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC12.39□□□□□ -0.43
Usp4P35123 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Usp4P35123 Gm37969-201ENSMUST00000195777 3409 ntBASIC12.39□□□□□ -0.43
Usp4P35123 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Usp4P35123 Gm7964-201ENSMUST00000051522 1378 ntBASIC12.39□□□□□ -0.43
Usp4P35123 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Usp4P35123 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Usp4P35123 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Usp4P35123 AC122811.1-201ENSMUST00000222257 2921 ntBASIC12.39□□□□□ -0.43
Usp4P35123 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Usp4P35123 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Usp4P35123 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Usp4P35123 Gm8146-201ENSMUST00000192106 1847 ntBASIC12.39□□□□□ -0.43
Usp4P35123 Gm7642-201ENSMUST00000216345 1809 ntBASIC12.39□□□□□ -0.43
Usp4P35123 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Usp4P35123 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Usp4P35123 AC154671.1-201ENSMUST00000228617 1578 ntBASIC12.39□□□□□ -0.43
Usp4P35123 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Usp4P35123 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Usp4P35123 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Usp4P35123 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Usp4P35123 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Usp4P35123 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Usp4P35123 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Usp4P35123 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Usp4P35123 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Usp4P35123 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Usp4P35123 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Usp4P35123 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Usp4P35123 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Usp4P35123 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Usp4P35123 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Usp4P35123 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Usp4P35123 Gm24934-201ENSMUST00000103764 111 ntBASIC12.38□□□□□ -0.43
Usp4P35123 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Usp4P35123 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC12.38□□□□□ -0.43
Usp4P35123 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Usp4P35123 Mir5132-201ENSMUST00000175166 71 ntBASIC12.38□□□□□ -0.43
Usp4P35123 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Usp4P35123 Gm5706-201ENSMUST00000181525 993 ntBASIC12.38□□□□□ -0.43
Usp4P35123 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC12.38□□□□□ -0.43
Usp4P35123 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC12.38□□□□□ -0.43
Usp4P35123 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC12.38□□□□□ -0.43
Usp4P35123 Gm31256-201ENSMUST00000194705 506 ntBASIC12.38□□□□□ -0.43
Usp4P35123 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC12.38□□□□□ -0.43
Usp4P35123 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Usp4P35123 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Usp4P35123 Gm7619-201ENSMUST00000210649 1282 ntBASIC12.38□□□□□ -0.43
Usp4P35123 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC12.38□□□□□ -0.43
Usp4P35123 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC12.38□□□□□ -0.43
Usp4P35123 Gm30285-201ENSMUST00000214614 422 ntBASIC12.38□□□□□ -0.43
Usp4P35123 CT030182.1-201ENSMUST00000225935 533 ntBASIC12.38□□□□□ -0.43
Usp4P35123 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Usp4P35123 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Usp4P35123 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Usp4P35123 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Usp4P35123 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Usp4P35123 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Usp4P35123 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms