Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Mmp13P33435 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Mmp13P33435 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Mmp13P33435 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Mmp13P33435 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC12.1□□□□□ -0.47
Mmp13P33435 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Mmp13P33435 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Mmp13P33435 Gm45677-201ENSMUST00000209975 1341 ntBASIC12.1□□□□□ -0.47
Mmp13P33435 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Mmp13P33435 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Mmp13P33435 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Mmp13P33435 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Mmp13P33435 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Mmp13P33435 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Mmp13P33435 AC123857.2-201ENSMUST00000225756 1582 ntBASIC12.09□□□□□ -0.47
Mmp13P33435 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Mmp13P33435 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Mmp13P33435 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Mmp13P33435 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Mmp13P33435 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC12.09□□□□□ -0.47
Mmp13P33435 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Mmp13P33435 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Mmp13P33435 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Mmp13P33435 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Mmp13P33435 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Mmp13P33435 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC12.09□□□□□ -0.47
Mmp13P33435 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Mmp13P33435 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Mmp13P33435 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Mmp13P33435 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Mmp13P33435 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Mmp13P33435 Gm12012-201ENSMUST00000118857 1066 ntBASIC12.09□□□□□ -0.47
Mmp13P33435 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Mmp13P33435 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Mmp13P33435 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Mmp13P33435 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Mmp13P33435 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Mmp13P33435 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Mmp13P33435 Gm44967-201ENSMUST00000207047 631 ntBASIC12.09□□□□□ -0.47
Mmp13P33435 Gm17931-201ENSMUST00000208132 634 ntBASIC12.09□□□□□ -0.47
Mmp13P33435 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC12.09□□□□□ -0.47
Mmp13P33435 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Mmp13P33435 Rassf8-202ENSMUST00000058538 1131 ntBASIC12.09□□□□□ -0.47
Mmp13P33435 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Mmp13P33435 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Mmp13P33435 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Mmp13P33435 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Mmp13P33435 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC12.09□□□□□ -0.47
Mmp13P33435 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Mmp13P33435 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC12.09□□□□□ -0.47
Mmp13P33435 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Mmp13P33435 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Mmp13P33435 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Mmp13P33435 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Mmp13P33435 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Mmp13P33435 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Mmp13P33435 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Mmp13P33435 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Mmp13P33435 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Mmp13P33435 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.47
Mmp13P33435 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Mmp13P33435 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Mmp13P33435 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC12.08□□□□□ -0.48
Mmp13P33435 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Mmp13P33435 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Mmp13P33435 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Mmp13P33435 Gm37931-201ENSMUST00000194686 2866 ntBASIC12.08□□□□□ -0.48
Mmp13P33435 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Mmp13P33435 Gm14832-201ENSMUST00000121289 322 ntBASIC12.08□□□□□ -0.48
Mmp13P33435 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC12.08□□□□□ -0.48
Mmp13P33435 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Mmp13P33435 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Mmp13P33435 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC12.08□□□□□ -0.48
Mmp13P33435 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC12.08□□□□□ -0.48
Mmp13P33435 Gm44651-201ENSMUST00000207343 372 ntBASIC12.08□□□□□ -0.48
Mmp13P33435 CT573034.1-201ENSMUST00000222983 313 ntBASIC12.08□□□□□ -0.48
Mmp13P33435 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Mmp13P33435 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Mmp13P33435 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC12.08□□□□□ -0.48
Mmp13P33435 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Mmp13P33435 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Mmp13P33435 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Mmp13P33435 Mir433-201ENSMUST00000093564 124 ntBASIC12.08□□□□□ -0.48
Mmp13P33435 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Mmp13P33435 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Mmp13P33435 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Mmp13P33435 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Mmp13P33435 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Mmp13P33435 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Mmp13P33435 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Mmp13P33435 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Mmp13P33435 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Mmp13P33435 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Mmp13P33435 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Mmp13P33435 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Mmp13P33435 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Mmp13P33435 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC12.08□□□□□ -0.48
Mmp13P33435 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Mmp13P33435 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Mmp13P33435 AC126444.1-201ENSMUST00000225938 1768 ntBASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms