Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Slc6a11P31650 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Slc6a11P31650 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Slc6a11P31650 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC11.25□□□□□ -0.61
Slc6a11P31650 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC11.25□□□□□ -0.61
Slc6a11P31650 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Slc6a11P31650 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Slc6a11P31650 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Slc6a11P31650 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Slc6a11P31650 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Slc6a11P31650 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Slc6a11P31650 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Slc6a11P31650 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC11.25□□□□□ -0.61
Slc6a11P31650 Gm15547-201ENSMUST00000122152 333 ntBASIC11.25□□□□□ -0.61
Slc6a11P31650 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC11.25□□□□□ -0.61
Slc6a11P31650 Gm13570-201ENSMUST00000140763 309 ntBASIC11.25□□□□□ -0.61
Slc6a11P31650 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
Slc6a11P31650 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Slc6a11P31650 Gm27023-201ENSMUST00000182372 285 ntBASIC11.25□□□□□ -0.61
Slc6a11P31650 Gm28450-201ENSMUST00000187349 638 ntBASIC11.25□□□□□ -0.61
Slc6a11P31650 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC11.25□□□□□ -0.61
Slc6a11P31650 AA914427-201ENSMUST00000193194 1166 ntBASIC11.25□□□□□ -0.61
Slc6a11P31650 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC11.25□□□□□ -0.61
Slc6a11P31650 AC153929.1-201ENSMUST00000219009 303 ntBASIC11.25□□□□□ -0.61
Slc6a11P31650 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC11.25□□□□□ -0.61
Slc6a11P31650 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Slc6a11P31650 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Slc6a11P31650 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Slc6a11P31650 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Slc6a11P31650 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Slc6a11P31650 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Slc6a11P31650 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Slc6a11P31650 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
Slc6a11P31650 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Slc6a11P31650 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Slc6a11P31650 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Slc6a11P31650 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC11.25□□□□□ -0.61
Slc6a11P31650 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Slc6a11P31650 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Slc6a11P31650 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Slc6a11P31650 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Slc6a11P31650 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Slc6a11P31650 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Slc6a11P31650 Gm44152-201ENSMUST00000205007 1691 ntBASIC11.24□□□□□ -0.61
Slc6a11P31650 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Slc6a11P31650 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Slc6a11P31650 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Slc6a11P31650 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Slc6a11P31650 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Slc6a11P31650 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC11.24□□□□□ -0.61
Slc6a11P31650 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Slc6a11P31650 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC11.24□□□□□ -0.61
Slc6a11P31650 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC11.24□□□□□ -0.61
Slc6a11P31650 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Slc6a11P31650 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Slc6a11P31650 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC11.24□□□□□ -0.61
Slc6a11P31650 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Slc6a11P31650 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Slc6a11P31650 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Slc6a11P31650 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Slc6a11P31650 Gm2546-201ENSMUST00000182630 991 ntBASIC11.24□□□□□ -0.61
Slc6a11P31650 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC11.24□□□□□ -0.61
Slc6a11P31650 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Slc6a11P31650 AU022133-201ENSMUST00000200601 873 ntBASIC11.24□□□□□ -0.61
Slc6a11P31650 AC154680.1-201ENSMUST00000224376 859 ntBASIC11.24□□□□□ -0.61
Slc6a11P31650 AC161537.1-201ENSMUST00000226199 1015 ntBASIC11.24□□□□□ -0.61
Slc6a11P31650 Gm9826-201ENSMUST00000029124 1299 ntBASIC11.24□□□□□ -0.61
Slc6a11P31650 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Slc6a11P31650 Gm8385-201ENSMUST00000058999 643 ntBASIC11.24□□□□□ -0.61
Slc6a11P31650 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Slc6a11P31650 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC11.24□□□□□ -0.61
Slc6a11P31650 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Slc6a11P31650 Gm18782-201ENSMUST00000209023 1399 ntBASIC11.24□□□□□ -0.61
Slc6a11P31650 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Slc6a11P31650 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC11.24□□□□□ -0.61
Slc6a11P31650 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Slc6a11P31650 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC11.24□□□□□ -0.61
Slc6a11P31650 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Slc6a11P31650 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Slc6a11P31650 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Slc6a11P31650 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Slc6a11P31650 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Slc6a11P31650 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Slc6a11P31650 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC11.24□□□□□ -0.61
Slc6a11P31650 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Slc6a11P31650 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Slc6a11P31650 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Slc6a11P31650 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Slc6a11P31650 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Slc6a11P31650 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Slc6a11P31650 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC11.23□□□□□ -0.61
Slc6a11P31650 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Slc6a11P31650 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Slc6a11P31650 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Slc6a11P31650 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Slc6a11P31650 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Slc6a11P31650 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Slc6a11P31650 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Slc6a11P31650 Gm11531-201ENSMUST00000117614 555 ntBASIC11.23□□□□□ -0.61
Slc6a11P31650 Gm13875-201ENSMUST00000120162 282 ntBASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms