Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Gm9947-201ENSMUST00000067599 2920 ntBASIC12.63□□□□□ -0.39
Mmp3P28862 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Mmp3P28862 AC108858.2-201ENSMUST00000228186 1425 ntBASIC12.62□□□□□ -0.39
Mmp3P28862 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Mmp3P28862 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Mmp3P28862 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Mmp3P28862 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Mmp3P28862 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Mmp3P28862 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Mmp3P28862 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Mmp3P28862 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Mmp3P28862 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.62□□□□□ -0.39
Mmp3P28862 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Mmp3P28862 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Mmp3P28862 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Mmp3P28862 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Mmp3P28862 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC12.62□□□□□ -0.39
Mmp3P28862 Gm12516-201ENSMUST00000120819 385 ntBASIC12.62□□□□□ -0.39
Mmp3P28862 Gm9089-201ENSMUST00000122027 526 ntBASIC12.62□□□□□ -0.39
Mmp3P28862 Gm11960-201ENSMUST00000122068 925 ntBASIC12.62□□□□□ -0.39
Mmp3P28862 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Mmp3P28862 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
Mmp3P28862 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Mmp3P28862 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Mmp3P28862 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC12.62□□□□□ -0.39
Mmp3P28862 Gm34023-201ENSMUST00000195539 217 ntBASIC12.62□□□□□ -0.39
Mmp3P28862 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC12.62□□□□□ -0.39
Mmp3P28862 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC12.62□□□□□ -0.39
Mmp3P28862 Gm2875-201ENSMUST00000211333 360 ntBASIC12.62□□□□□ -0.39
Mmp3P28862 AC132901.1-201ENSMUST00000224345 508 ntBASIC12.62□□□□□ -0.39
Mmp3P28862 Gm4978-201ENSMUST00000071565 801 ntBASIC12.62□□□□□ -0.39
Mmp3P28862 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Mmp3P28862 Mirlet7i-201ENSMUST00000083472 85 ntBASIC12.62□□□□□ -0.39
Mmp3P28862 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Mmp3P28862 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Mmp3P28862 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Mmp3P28862 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Mmp3P28862 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Mmp3P28862 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Mmp3P28862 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Mmp3P28862 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Mmp3P28862 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Mmp3P28862 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Mmp3P28862 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.62□□□□□ -0.39
Mmp3P28862 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Mmp3P28862 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Mmp3P28862 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Mmp3P28862 Gm13384-201ENSMUST00000117166 1344 ntBASIC12.62□□□□□ -0.39
Mmp3P28862 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Mmp3P28862 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.61□□□□□ -0.39
Mmp3P28862 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Mmp3P28862 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Mmp3P28862 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Mmp3P28862 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Mmp3P28862 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Mmp3P28862 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Mmp3P28862 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Mmp3P28862 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Mmp3P28862 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Mmp3P28862 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Mmp3P28862 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Mmp3P28862 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Mmp3P28862 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Mmp3P28862 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC12.61□□□□□ -0.39
Mmp3P28862 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Mmp3P28862 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Mmp3P28862 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Mmp3P28862 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Mmp3P28862 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Mmp3P28862 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Mmp3P28862 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Mmp3P28862 Gm23272-201ENSMUST00000104053 129 ntBASIC12.61□□□□□ -0.39
Mmp3P28862 Gm14942-201ENSMUST00000119642 336 ntBASIC12.61□□□□□ -0.39
Mmp3P28862 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC12.61□□□□□ -0.39
Mmp3P28862 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC12.61□□□□□ -0.39
Mmp3P28862 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Mmp3P28862 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Mmp3P28862 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
Mmp3P28862 Gm9358-201ENSMUST00000183067 927 ntBASIC12.61□□□□□ -0.39
Mmp3P28862 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC12.61□□□□□ -0.39
Mmp3P28862 Gm28388-201ENSMUST00000186262 437 ntBASIC12.61□□□□□ -0.39
Mmp3P28862 Gm7504-201ENSMUST00000201449 424 ntBASIC12.61□□□□□ -0.39
Mmp3P28862 Gm42657-201ENSMUST00000201746 211 ntBASIC12.61□□□□□ -0.39
Mmp3P28862 Gm44315-201ENSMUST00000203041 219 ntBASIC12.61□□□□□ -0.39
Mmp3P28862 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC12.61□□□□□ -0.39
Mmp3P28862 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Mmp3P28862 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Mmp3P28862 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC12.61□□□□□ -0.39
Mmp3P28862 Gm5451-201ENSMUST00000080545 579 ntBASIC12.61□□□□□ -0.39
Mmp3P28862 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.61□□□□□ -0.39
Mmp3P28862 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Mmp3P28862 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC12.61□□□□□ -0.39
Mmp3P28862 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Mmp3P28862 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Mmp3P28862 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC12.61□□□□□ -0.39
Mmp3P28862 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Mmp3P28862 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Mmp3P28862 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Mmp3P28862 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Mmp3P28862 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms