Protein–RNA interactions for Protein: P28230

Gjb1, Gap junction beta-1 protein, mousemouse

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gjb1P28230 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Gjb1P28230 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gjb1P28230 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC13.17□□□□□ -0.3
Gjb1P28230 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
Gjb1P28230 Gm18294-201ENSMUST00000176980 1748 ntBASIC13.17□□□□□ -0.3
Gjb1P28230 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gjb1P28230 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gjb1P28230 Ighv7-1-201ENSMUST00000103474 363 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Gjb1P28230 Gm11244-201ENSMUST00000121243 237 ntBASIC13.17□□□□□ -0.3
Gjb1P28230 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gjb1P28230 Gm23400-201ENSMUST00000174994 102 ntBASIC13.17□□□□□ -0.3
Gjb1P28230 Gm26463-201ENSMUST00000175065 101 ntBASIC13.17□□□□□ -0.3
Gjb1P28230 Gm24332-201ENSMUST00000175102 102 ntBASIC13.17□□□□□ -0.3
Gjb1P28230 Gm25959-201ENSMUST00000175112 102 ntBASIC13.17□□□□□ -0.3
Gjb1P28230 Gm22475-201ENSMUST00000175169 102 ntBASIC13.17□□□□□ -0.3
Gjb1P28230 Gm22903-201ENSMUST00000175193 102 ntBASIC13.17□□□□□ -0.3
Gjb1P28230 Gm25070-201ENSMUST00000175237 102 ntBASIC13.17□□□□□ -0.3
Gjb1P28230 Gm24159-201ENSMUST00000175264 102 ntBASIC13.17□□□□□ -0.3
Gjb1P28230 Gm25299-201ENSMUST00000175283 102 ntBASIC13.17□□□□□ -0.3
Gjb1P28230 Gm23798-201ENSMUST00000175560 102 ntBASIC13.17□□□□□ -0.3
Gjb1P28230 Gm23802-201ENSMUST00000175565 102 ntBASIC13.17□□□□□ -0.3
Gjb1P28230 Gm25708-201ENSMUST00000177687 102 ntBASIC13.17□□□□□ -0.3
Gjb1P28230 Gm24370-201ENSMUST00000178007 102 ntBASIC13.17□□□□□ -0.3
Gjb1P28230 Gm23049-201ENSMUST00000178068 102 ntBASIC13.17□□□□□ -0.3
Gjb1P28230 Gm28019-201ENSMUST00000178138 101 ntBASIC13.17□□□□□ -0.3
Gjb1P28230 Gm25571-201ENSMUST00000178322 102 ntBASIC13.17□□□□□ -0.3
Gjb1P28230 Gm25355-201ENSMUST00000178456 101 ntBASIC13.17□□□□□ -0.3
Gjb1P28230 Gm24975-201ENSMUST00000178492 101 ntBASIC13.17□□□□□ -0.3
Gjb1P28230 Gm23189-201ENSMUST00000178954 102 ntBASIC13.17□□□□□ -0.3
Gjb1P28230 Gm25100-201ENSMUST00000179750 101 ntBASIC13.17□□□□□ -0.3
Gjb1P28230 Gm23064-201ENSMUST00000179866 101 ntBASIC13.17□□□□□ -0.3
Gjb1P28230 Gm9081-201ENSMUST00000182346 991 ntBASIC13.17□□□□□ -0.3
Gjb1P28230 Gm18776-201ENSMUST00000188833 654 ntBASIC13.17□□□□□ -0.3
Gjb1P28230 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Gjb1P28230 Ndufc1-204ENSMUST00000193279 315 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
Gjb1P28230 Gm44882-201ENSMUST00000205702 802 ntBASIC13.17□□□□□ -0.3
Gjb1P28230 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC13.17□□□□□ -0.3
Gjb1P28230 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Gjb1P28230 CT009546.1-201ENSMUST00000222573 1120 ntBASIC13.17□□□□□ -0.3
Gjb1P28230 Triap1-201ENSMUST00000031508 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gjb1P28230 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Gjb1P28230 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gjb1P28230 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gjb1P28230 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Gjb1P28230 AC160405.1-201ENSMUST00000218207 1545 ntBASIC13.17□□□□□ -0.3
Gjb1P28230 Mapk1ip1-201ENSMUST00000075667 1502 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gjb1P28230 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gjb1P28230 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Gjb1P28230 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gjb1P28230 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gjb1P28230 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gjb1P28230 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gjb1P28230 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gjb1P28230 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Gjb1P28230 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gjb1P28230 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gjb1P28230 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gjb1P28230 Gm37131-201ENSMUST00000192502 1561 ntBASIC13.16□□□□□ -0.3
Gjb1P28230 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC13.16□□□□□ -0.3
Gjb1P28230 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Gjb1P28230 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Gjb1P28230 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gjb1P28230 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gjb1P28230 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
Gjb1P28230 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gjb1P28230 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Gjb1P28230 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC13.16□□□□□ -0.3
Gjb1P28230 Gm23255-201ENSMUST00000102244 110 ntBASIC13.16□□□□□ -0.3
Gjb1P28230 Gm12663-201ENSMUST00000118481 958 ntBASIC13.16□□□□□ -0.3
Gjb1P28230 Gm11634-201ENSMUST00000154147 755 ntAPPRIS ALT2 TSL 3 BASIC13.16□□□□□ -0.3
Gjb1P28230 Ccndbp1-208ENSMUST00000171260 1187 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Gjb1P28230 Mir6973a-201ENSMUST00000183646 78 ntBASIC13.16□□□□□ -0.3
Gjb1P28230 Nmbr-207ENSMUST00000190751 921 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Gjb1P28230 Gm45085-201ENSMUST00000209100 441 ntBASIC13.16□□□□□ -0.3
Gjb1P28230 Gm20735-202ENSMUST00000212387 519 ntTSL 2 BASIC13.16□□□□□ -0.3
Gjb1P28230 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC13.16□□□□□ -0.3
Gjb1P28230 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC13.16□□□□□ -0.3
Gjb1P28230 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Gjb1P28230 Gm10263-201ENSMUST00000085163 300 ntBASIC13.16□□□□□ -0.3
Gjb1P28230 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gjb1P28230 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gjb1P28230 Schip1-202ENSMUST00000169909 1517 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Gjb1P28230 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gjb1P28230 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gjb1P28230 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Gjb1P28230 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Gjb1P28230 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Gjb1P28230 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gjb1P28230 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gjb1P28230 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gjb1P28230 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Gjb1P28230 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gjb1P28230 Gm17213-201ENSMUST00000165161 1360 ntBASIC13.16□□□□□ -0.3
Gjb1P28230 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gjb1P28230 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Gjb1P28230 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Gjb1P28230 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gjb1P28230 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Gjb1P28230 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Gjb1P28230 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms