Protein–RNA interactions for Protein: P24549

Aldh1a1, Retinal dehydrogenase 1, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aldh1a1P24549 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Aldh1a1P24549 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.81□□□□□ -0.36
Aldh1a1P24549 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Aldh1a1P24549 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Aldh1a1P24549 Zeb2os-201ENSMUST00000127150 1305 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Aldh1a1P24549 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Aldh1a1P24549 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Aldh1a1P24549 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Aldh1a1P24549 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Aldh1a1P24549 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Aldh1a1P24549 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.81□□□□□ -0.36
Aldh1a1P24549 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.81□□□□□ -0.36
Aldh1a1P24549 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Aldh1a1P24549 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Aldh1a1P24549 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Aldh1a1P24549 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Aldh1a1P24549 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Aldh1a1P24549 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Aldh1a1P24549 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Aldh1a1P24549 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Aldh1a1P24549 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Aldh1a1P24549 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Aldh1a1P24549 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.8□□□□□ -0.36
Aldh1a1P24549 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Aldh1a1P24549 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Aldh1a1P24549 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Aldh1a1P24549 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Aldh1a1P24549 Gm24791-201ENSMUST00000104284 131 ntBASIC12.8□□□□□ -0.36
Aldh1a1P24549 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Aldh1a1P24549 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC12.8□□□□□ -0.36
Aldh1a1P24549 Gm12030-201ENSMUST00000121917 223 ntBASIC12.8□□□□□ -0.36
Aldh1a1P24549 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Aldh1a1P24549 Gm8502-201ENSMUST00000185708 901 ntBASIC12.8□□□□□ -0.36
Aldh1a1P24549 Gm8510-201ENSMUST00000189202 895 ntBASIC12.8□□□□□ -0.36
Aldh1a1P24549 Gm2316-201ENSMUST00000190613 921 ntBASIC12.8□□□□□ -0.36
Aldh1a1P24549 Gm45113-201ENSMUST00000207518 165 ntBASIC12.8□□□□□ -0.36
Aldh1a1P24549 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Aldh1a1P24549 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Aldh1a1P24549 Gm45410-201ENSMUST00000211331 1093 ntBASIC12.8□□□□□ -0.36
Aldh1a1P24549 Gm7940-201ENSMUST00000218195 769 ntBASIC12.8□□□□□ -0.36
Aldh1a1P24549 AC140375.1-201ENSMUST00000225421 694 ntBASIC12.8□□□□□ -0.36
Aldh1a1P24549 Cxcl13-201ENSMUST00000023840 1150 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Aldh1a1P24549 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Aldh1a1P24549 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Aldh1a1P24549 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Aldh1a1P24549 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Aldh1a1P24549 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Aldh1a1P24549 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Aldh1a1P24549 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Aldh1a1P24549 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Aldh1a1P24549 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Aldh1a1P24549 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Aldh1a1P24549 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC12.8□□□□□ -0.36
Aldh1a1P24549 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Aldh1a1P24549 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
Aldh1a1P24549 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Aldh1a1P24549 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Aldh1a1P24549 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
Aldh1a1P24549 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Aldh1a1P24549 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Aldh1a1P24549 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC12.79□□□□□ -0.36
Aldh1a1P24549 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Aldh1a1P24549 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Aldh1a1P24549 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Aldh1a1P24549 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Aldh1a1P24549 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.79□□□□□ -0.36
Aldh1a1P24549 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Aldh1a1P24549 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC12.79□□□□□ -0.36
Aldh1a1P24549 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC12.79□□□□□ -0.36
Aldh1a1P24549 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Aldh1a1P24549 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Aldh1a1P24549 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Aldh1a1P24549 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Aldh1a1P24549 Gm13117-201ENSMUST00000120894 691 ntBASIC12.79□□□□□ -0.36
Aldh1a1P24549 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Aldh1a1P24549 Gm14133-201ENSMUST00000139471 1274 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Aldh1a1P24549 Gm22146-201ENSMUST00000157397 288 ntBASIC12.79□□□□□ -0.36
Aldh1a1P24549 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC12.79□□□□□ -0.36
Aldh1a1P24549 Gm9630-201ENSMUST00000178304 885 ntBASIC12.79□□□□□ -0.36
Aldh1a1P24549 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Aldh1a1P24549 1600019K03Rik-201ENSMUST00000187829 477 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Aldh1a1P24549 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC12.79□□□□□ -0.36
Aldh1a1P24549 Gm44251-201ENSMUST00000204963 442 ntBASIC12.79□□□□□ -0.36
Aldh1a1P24549 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Aldh1a1P24549 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Aldh1a1P24549 Lgi3-203ENSMUST00000226548 1001 ntBASIC12.79□□□□□ -0.36
Aldh1a1P24549 Rasl11a-201ENSMUST00000031646 1126 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Aldh1a1P24549 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Aldh1a1P24549 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Aldh1a1P24549 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Aldh1a1P24549 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Aldh1a1P24549 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC12.79□□□□□ -0.36
Aldh1a1P24549 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Aldh1a1P24549 Mbnl2-204ENSMUST00000227012 2390 ntBASIC12.79□□□□□ -0.36
Aldh1a1P24549 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Aldh1a1P24549 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Aldh1a1P24549 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Aldh1a1P24549 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Aldh1a1P24549 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Aldh1a1P24549 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms