Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Gm18806-201ENSMUST00000207607 1775 ntBASIC10.78□□□□□ -0.68
Hmgn1P18608 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hmgn1P18608 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hmgn1P18608 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Hmgn1P18608 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hmgn1P18608 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hmgn1P18608 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hmgn1P18608 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hmgn1P18608 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Hmgn1P18608 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Hmgn1P18608 Gm13326-201ENSMUST00000118730 1011 ntBASIC10.78□□□□□ -0.68
Hmgn1P18608 Gm12490-201ENSMUST00000120255 560 ntBASIC10.78□□□□□ -0.68
Hmgn1P18608 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC10.78□□□□□ -0.68
Hmgn1P18608 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC10.78□□□□□ -0.68
Hmgn1P18608 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hmgn1P18608 Gm24845-201ENSMUST00000158034 109 ntBASIC10.78□□□□□ -0.68
Hmgn1P18608 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC10.78□□□□□ -0.68
Hmgn1P18608 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC10.78□□□□□ -0.68
Hmgn1P18608 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Hmgn1P18608 AC154252.2-201ENSMUST00000223593 767 ntBASIC10.78□□□□□ -0.68
Hmgn1P18608 CU024892.2-201ENSMUST00000224608 832 ntBASIC10.78□□□□□ -0.68
Hmgn1P18608 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hmgn1P18608 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hmgn1P18608 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hmgn1P18608 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Hmgn1P18608 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hmgn1P18608 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hmgn1P18608 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hmgn1P18608 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Hmgn1P18608 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hmgn1P18608 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Hmgn1P18608 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC10.78□□□□□ -0.68
Hmgn1P18608 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Hmgn1P18608 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hmgn1P18608 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hmgn1P18608 Gm36957-201ENSMUST00000192982 2824 ntBASIC10.78□□□□□ -0.68
Hmgn1P18608 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Hmgn1P18608 AC127597.1-201ENSMUST00000225697 5711 ntBASIC10.78□□□□□ -0.68
Hmgn1P18608 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Hmgn1P18608 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hmgn1P18608 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Hmgn1P18608 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Hmgn1P18608 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC10.77□□□□□ -0.68
Hmgn1P18608 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.68
Hmgn1P18608 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Hmgn1P18608 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Hmgn1P18608 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Hmgn1P18608 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Hmgn1P18608 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Hmgn1P18608 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC10.77□□□□□ -0.68
Hmgn1P18608 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Hmgn1P18608 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Hmgn1P18608 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Hmgn1P18608 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Hmgn1P18608 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Hmgn1P18608 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Hmgn1P18608 Gm19221-201ENSMUST00000221827 1477 ntBASIC10.77□□□□□ -0.69
Hmgn1P18608 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Hmgn1P18608 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Hmgn1P18608 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Hmgn1P18608 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Hmgn1P18608 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC10.77□□□□□ -0.69
Hmgn1P18608 Gm7722-201ENSMUST00000120646 741 ntBASIC10.77□□□□□ -0.69
Hmgn1P18608 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC10.77□□□□□ -0.69
Hmgn1P18608 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC10.77□□□□□ -0.69
Hmgn1P18608 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC10.77□□□□□ -0.69
Hmgn1P18608 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC10.77□□□□□ -0.69
Hmgn1P18608 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC10.77□□□□□ -0.69
Hmgn1P18608 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Hmgn1P18608 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Hmgn1P18608 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Hmgn1P18608 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC10.77□□□□□ -0.69
Hmgn1P18608 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Hmgn1P18608 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
Hmgn1P18608 Gm21939-201ENSMUST00000221137 2773 ntBASIC10.77□□□□□ -0.69
Hmgn1P18608 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Hmgn1P18608 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Hmgn1P18608 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Hmgn1P18608 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Hmgn1P18608 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Hmgn1P18608 Gm9466-201ENSMUST00000218144 2246 ntBASIC10.77□□□□□ -0.69
Hmgn1P18608 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Hmgn1P18608 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC10.77□□□□□ -0.69
Hmgn1P18608 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Hmgn1P18608 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Hmgn1P18608 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Hmgn1P18608 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
Hmgn1P18608 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Hmgn1P18608 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Hmgn1P18608 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Hmgn1P18608 Gm7841-201ENSMUST00000122108 1629 ntBASIC10.76□□□□□ -0.69
Hmgn1P18608 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Hmgn1P18608 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Hmgn1P18608 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC10.76□□□□□ -0.69
Hmgn1P18608 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Hmgn1P18608 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Hmgn1P18608 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Hmgn1P18608 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Hmgn1P18608 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
Hmgn1P18608 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 81.7 ms