Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
NclP09405 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NclP09405 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NclP09405 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
NclP09405 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
NclP09405 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NclP09405 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
NclP09405 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
NclP09405 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
NclP09405 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NclP09405 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NclP09405 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
NclP09405 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NclP09405 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC17.53■□□□□ 0.4
NclP09405 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC17.53■□□□□ 0.4
NclP09405 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
NclP09405 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NclP09405 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC17.53■□□□□ 0.4
NclP09405 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC17.53■□□□□ 0.4
NclP09405 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC17.53■□□□□ 0.4
NclP09405 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NclP09405 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
NclP09405 Gm9192-201ENSMUST00000183221 985 ntBASIC17.53■□□□□ 0.4
NclP09405 Gm6108-201ENSMUST00000208365 367 ntBASIC17.53■□□□□ 0.4
NclP09405 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC17.53■□□□□ 0.4
NclP09405 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
NclP09405 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC17.53■□□□□ 0.4
NclP09405 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
NclP09405 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NclP09405 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NclP09405 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NclP09405 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
NclP09405 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
NclP09405 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC17.53■□□□□ 0.4
NclP09405 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NclP09405 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NclP09405 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
NclP09405 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
NclP09405 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NclP09405 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC17.52■□□□□ 0.4
NclP09405 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
NclP09405 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NclP09405 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
NclP09405 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
NclP09405 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
NclP09405 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
NclP09405 Gm11783-201ENSMUST00000119549 885 ntBASIC17.52■□□□□ 0.4
NclP09405 Gm12208-201ENSMUST00000122004 163 ntBASIC17.52■□□□□ 0.4
NclP09405 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC17.52■□□□□ 0.4
NclP09405 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC17.52■□□□□ 0.4
NclP09405 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC17.52■□□□□ 0.4
NclP09405 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
NclP09405 Gm9463-201ENSMUST00000206707 601 ntBASIC17.52■□□□□ 0.4
NclP09405 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC17.52■□□□□ 0.4
NclP09405 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NclP09405 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NclP09405 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
NclP09405 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NclP09405 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NclP09405 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
NclP09405 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
NclP09405 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
NclP09405 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
NclP09405 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
NclP09405 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
NclP09405 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
NclP09405 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
NclP09405 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
NclP09405 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
NclP09405 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
NclP09405 Gm5380-201ENSMUST00000119296 2136 ntBASIC17.51■□□□□ 0.39
NclP09405 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
NclP09405 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NclP09405 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
NclP09405 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
NclP09405 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NclP09405 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NclP09405 Gm22711-201ENSMUST00000116890 133 ntBASIC17.51■□□□□ 0.39
NclP09405 Gm15172-201ENSMUST00000118945 1046 ntBASIC17.51■□□□□ 0.39
NclP09405 Gm13328-201ENSMUST00000120816 1020 ntBASIC17.51■□□□□ 0.39
NclP09405 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NclP09405 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
NclP09405 Gm27390-201ENSMUST00000184516 176 ntBASIC17.51■□□□□ 0.39
NclP09405 Gm28937-201ENSMUST00000185413 695 ntBASIC17.51■□□□□ 0.39
NclP09405 Gm29400-201ENSMUST00000187208 695 ntBASIC17.51■□□□□ 0.39
NclP09405 Gm28662-201ENSMUST00000188446 695 ntBASIC17.51■□□□□ 0.39
NclP09405 Gm28251-201ENSMUST00000188835 695 ntBASIC17.51■□□□□ 0.39
NclP09405 Gm37318-201ENSMUST00000194325 695 ntBASIC17.51■□□□□ 0.39
NclP09405 Gm38017-201ENSMUST00000194768 695 ntBASIC17.51■□□□□ 0.39
NclP09405 Gm37287-201ENSMUST00000195449 695 ntBASIC17.51■□□□□ 0.39
NclP09405 Gm37793-201ENSMUST00000195548 695 ntBASIC17.51■□□□□ 0.39
NclP09405 Gm42599-201ENSMUST00000201308 469 ntBASIC17.51■□□□□ 0.39
NclP09405 Gm18198-201ENSMUST00000204986 1551 ntBASIC17.51■□□□□ 0.39
NclP09405 Gm44506-201ENSMUST00000206278 965 ntBASIC17.51■□□□□ 0.39
NclP09405 Gm7940-201ENSMUST00000218195 769 ntBASIC17.51■□□□□ 0.39
NclP09405 AC115122.1-201ENSMUST00000224850 1040 ntBASIC17.51■□□□□ 0.39
NclP09405 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NclP09405 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
NclP09405 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC17.51■□□□□ 0.39
NclP09405 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms