Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC10.9□□□□□ -0.66
Cops4O88544 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Cops4O88544 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cops4O88544 Gm23912-201ENSMUST00000104687 87 ntBASIC10.9□□□□□ -0.66
Cops4O88544 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cops4O88544 Gm12314-201ENSMUST00000118104 538 ntBASIC10.9□□□□□ -0.66
Cops4O88544 Gm9431-201ENSMUST00000119765 1051 ntBASIC10.9□□□□□ -0.66
Cops4O88544 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC10.9□□□□□ -0.66
Cops4O88544 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cops4O88544 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC10.9□□□□□ -0.66
Cops4O88544 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cops4O88544 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cops4O88544 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC10.9□□□□□ -0.66
Cops4O88544 Gm17150-201ENSMUST00000165577 381 ntBASIC10.9□□□□□ -0.66
Cops4O88544 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cops4O88544 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Cops4O88544 Gm8738-201ENSMUST00000172606 329 ntBASIC10.9□□□□□ -0.66
Cops4O88544 Gm8835-201ENSMUST00000173096 1169 ntBASIC10.9□□□□□ -0.66
Cops4O88544 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC10.9□□□□□ -0.66
Cops4O88544 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
Cops4O88544 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cops4O88544 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC10.9□□□□□ -0.66
Cops4O88544 Gm45925-201ENSMUST00000218882 744 ntBASIC10.9□□□□□ -0.66
Cops4O88544 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC10.9□□□□□ -0.66
Cops4O88544 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cops4O88544 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cops4O88544 Gm17244-201ENSMUST00000192482 3416 ntBASIC10.9□□□□□ -0.66
Cops4O88544 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cops4O88544 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cops4O88544 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cops4O88544 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cops4O88544 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cops4O88544 Gm7553-201ENSMUST00000185805 1426 ntBASIC10.9□□□□□ -0.66
Cops4O88544 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cops4O88544 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Cops4O88544 Gm43931-201ENSMUST00000204817 2870 ntBASIC10.9□□□□□ -0.67
Cops4O88544 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Cops4O88544 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Cops4O88544 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Cops4O88544 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Cops4O88544 Gm7964-201ENSMUST00000051522 1378 ntBASIC10.9□□□□□ -0.67
Cops4O88544 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.67
Cops4O88544 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cops4O88544 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cops4O88544 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cops4O88544 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cops4O88544 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC10.89□□□□□ -0.67
Cops4O88544 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Cops4O88544 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cops4O88544 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cops4O88544 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cops4O88544 Gm43579-201ENSMUST00000202387 1307 ntBASIC10.89□□□□□ -0.67
Cops4O88544 Gm44152-201ENSMUST00000205007 1691 ntBASIC10.89□□□□□ -0.67
Cops4O88544 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC10.89□□□□□ -0.67
Cops4O88544 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cops4O88544 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cops4O88544 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
Cops4O88544 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cops4O88544 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cops4O88544 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cops4O88544 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Cops4O88544 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC10.89□□□□□ -0.67
Cops4O88544 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC10.89□□□□□ -0.67
Cops4O88544 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cops4O88544 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC10.89□□□□□ -0.67
Cops4O88544 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Cops4O88544 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Cops4O88544 Gm37748-201ENSMUST00000194379 1140 ntBASIC10.89□□□□□ -0.67
Cops4O88544 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC10.89□□□□□ -0.67
Cops4O88544 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cops4O88544 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cops4O88544 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Cops4O88544 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Cops4O88544 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cops4O88544 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cops4O88544 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Cops4O88544 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cops4O88544 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cops4O88544 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cops4O88544 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cops4O88544 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC10.89□□□□□ -0.67
Cops4O88544 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cops4O88544 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cops4O88544 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cops4O88544 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cops4O88544 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cops4O88544 Gm10548-201ENSMUST00000097631 2629 ntBASIC10.88□□□□□ -0.67
Cops4O88544 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cops4O88544 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cops4O88544 AC114008.2-201ENSMUST00000227699 1347 ntBASIC10.88□□□□□ -0.67
Cops4O88544 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Cops4O88544 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cops4O88544 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cops4O88544 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cops4O88544 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cops4O88544 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cops4O88544 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cops4O88544 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Cops4O88544 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cops4O88544 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms