Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
ChkaO54804 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
ChkaO54804 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
ChkaO54804 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
ChkaO54804 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ChkaO54804 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
ChkaO54804 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
ChkaO54804 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ChkaO54804 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
ChkaO54804 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ChkaO54804 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
ChkaO54804 Gm8862-201ENSMUST00000198379 1346 ntBASIC11.94□□□□□ -0.5
ChkaO54804 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ChkaO54804 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ChkaO54804 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
ChkaO54804 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC11.94□□□□□ -0.5
ChkaO54804 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
ChkaO54804 Gm11960-201ENSMUST00000122068 925 ntBASIC11.94□□□□□ -0.5
ChkaO54804 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
ChkaO54804 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC11.94□□□□□ -0.5
ChkaO54804 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
ChkaO54804 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
ChkaO54804 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC11.94□□□□□ -0.5
ChkaO54804 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
ChkaO54804 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
ChkaO54804 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
ChkaO54804 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
ChkaO54804 Gm43758-201ENSMUST00000199500 367 ntBASIC11.94□□□□□ -0.5
ChkaO54804 AC122371.3-201ENSMUST00000223402 1061 ntBASIC11.94□□□□□ -0.5
ChkaO54804 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ChkaO54804 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ChkaO54804 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
ChkaO54804 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ChkaO54804 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
ChkaO54804 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC11.94□□□□□ -0.5
ChkaO54804 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
ChkaO54804 AC126444.1-201ENSMUST00000225938 1768 ntBASIC11.94□□□□□ -0.5
ChkaO54804 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ChkaO54804 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ChkaO54804 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC11.94□□□□□ -0.5
ChkaO54804 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ChkaO54804 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ChkaO54804 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC11.94□□□□□ -0.5
ChkaO54804 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC11.94□□□□□ -0.5
ChkaO54804 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
ChkaO54804 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ChkaO54804 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
ChkaO54804 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
ChkaO54804 Gm18222-201ENSMUST00000202416 1387 ntBASIC11.93□□□□□ -0.5
ChkaO54804 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC11.93□□□□□ -0.5
ChkaO54804 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ChkaO54804 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ChkaO54804 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ChkaO54804 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ChkaO54804 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ChkaO54804 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
ChkaO54804 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC11.93□□□□□ -0.5
ChkaO54804 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
ChkaO54804 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
ChkaO54804 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
ChkaO54804 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ChkaO54804 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC11.93□□□□□ -0.5
ChkaO54804 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
ChkaO54804 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC11.93□□□□□ -0.5
ChkaO54804 Gm22323-201ENSMUST00000103832 109 ntBASIC11.93□□□□□ -0.5
ChkaO54804 Gm14109-201ENSMUST00000118814 309 ntBASIC11.93□□□□□ -0.5
ChkaO54804 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC11.93□□□□□ -0.5
ChkaO54804 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC11.93□□□□□ -0.5
ChkaO54804 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC11.93□□□□□ -0.5
ChkaO54804 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC11.93□□□□□ -0.5
ChkaO54804 Gm27046-201ENSMUST00000182160 463 ntBASIC11.93□□□□□ -0.5
ChkaO54804 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC11.93□□□□□ -0.5
ChkaO54804 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC11.93□□□□□ -0.5
ChkaO54804 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
ChkaO54804 Gm38314-201ENSMUST00000195709 625 ntBASIC11.93□□□□□ -0.5
ChkaO54804 Gm43002-201ENSMUST00000200310 155 ntBASIC11.93□□□□□ -0.5
ChkaO54804 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC11.93□□□□□ -0.5
ChkaO54804 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ChkaO54804 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ChkaO54804 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ChkaO54804 Gm5455-201ENSMUST00000058710 715 ntBASIC11.93□□□□□ -0.5
ChkaO54804 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ChkaO54804 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
ChkaO54804 Gm17383-201ENSMUST00000078739 1041 ntBASIC11.93□□□□□ -0.5
ChkaO54804 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ChkaO54804 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
ChkaO54804 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ChkaO54804 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ChkaO54804 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
ChkaO54804 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ChkaO54804 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ChkaO54804 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ChkaO54804 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
ChkaO54804 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
ChkaO54804 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ChkaO54804 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ChkaO54804 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
ChkaO54804 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ChkaO54804 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ChkaO54804 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms