Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ebf3O08791 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ebf3O08791 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ebf3O08791 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ebf3O08791 Gm43984-201ENSMUST00000204572 2864 ntBASIC12.32□□□□□ -0.44
Ebf3O08791 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ebf3O08791 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ebf3O08791 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ebf3O08791 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ebf3O08791 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ebf3O08791 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ebf3O08791 AC154639.1-201ENSMUST00000224393 2849 ntBASIC12.32□□□□□ -0.44
Ebf3O08791 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ebf3O08791 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ebf3O08791 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ebf3O08791 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Ebf3O08791 Gm23912-201ENSMUST00000104687 87 ntBASIC12.32□□□□□ -0.44
Ebf3O08791 Gm11663-201ENSMUST00000117888 290 ntBASIC12.32□□□□□ -0.44
Ebf3O08791 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC12.32□□□□□ -0.44
Ebf3O08791 Gm12164-201ENSMUST00000121695 551 ntBASIC12.32□□□□□ -0.44
Ebf3O08791 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC12.32□□□□□ -0.44
Ebf3O08791 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC12.32□□□□□ -0.44
Ebf3O08791 Gm9540-201ENSMUST00000188230 478 ntBASIC12.32□□□□□ -0.44
Ebf3O08791 Gm8956-201ENSMUST00000203939 825 ntBASIC12.32□□□□□ -0.44
Ebf3O08791 Gm9797-202ENSMUST00000218003 294 ntBASIC12.32□□□□□ -0.44
Ebf3O08791 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ebf3O08791 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ebf3O08791 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ebf3O08791 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ebf3O08791 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ebf3O08791 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ebf3O08791 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ebf3O08791 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ebf3O08791 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ebf3O08791 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ebf3O08791 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ebf3O08791 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ebf3O08791 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ebf3O08791 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ebf3O08791 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC12.32□□□□□ -0.44
Ebf3O08791 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC12.32□□□□□ -0.44
Ebf3O08791 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ebf3O08791 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ebf3O08791 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ebf3O08791 AC173482.6-201ENSMUST00000225889 1741 ntBASIC12.31□□□□□ -0.44
Ebf3O08791 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ebf3O08791 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC12.31□□□□□ -0.44
Ebf3O08791 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ebf3O08791 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ebf3O08791 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ebf3O08791 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ebf3O08791 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ebf3O08791 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Ebf3O08791 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ebf3O08791 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ebf3O08791 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ebf3O08791 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ebf3O08791 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ebf3O08791 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ebf3O08791 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Ebf3O08791 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ebf3O08791 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ebf3O08791 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Ebf3O08791 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ebf3O08791 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ebf3O08791 Gm5778-201ENSMUST00000171003 1072 ntBASIC12.31□□□□□ -0.44
Ebf3O08791 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Ebf3O08791 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Ebf3O08791 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC12.31□□□□□ -0.44
Ebf3O08791 Gm38228-201ENSMUST00000193169 1293 ntBASIC12.31□□□□□ -0.44
Ebf3O08791 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC12.31□□□□□ -0.44
Ebf3O08791 Gm45550-201ENSMUST00000209380 946 ntBASIC12.31□□□□□ -0.44
Ebf3O08791 Gm45398-201ENSMUST00000210561 165 ntBASIC12.31□□□□□ -0.44
Ebf3O08791 Gm18974-201ENSMUST00000221478 1031 ntBASIC12.31□□□□□ -0.44
Ebf3O08791 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.31□□□□□ -0.44
Ebf3O08791 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ebf3O08791 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ebf3O08791 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ebf3O08791 Gm21998-201ENSMUST00000117552 1308 ntBASIC12.31□□□□□ -0.44
Ebf3O08791 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.31□□□□□ -0.44
Ebf3O08791 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ebf3O08791 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ebf3O08791 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ebf3O08791 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC12.31□□□□□ -0.44
Ebf3O08791 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ebf3O08791 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Ebf3O08791 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ebf3O08791 Gm14150-201ENSMUST00000122404 1354 ntBASIC12.3□□□□□ -0.44
Ebf3O08791 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ebf3O08791 AC154671.1-201ENSMUST00000228617 1578 ntBASIC12.3□□□□□ -0.44
Ebf3O08791 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ebf3O08791 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ebf3O08791 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Ebf3O08791 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ebf3O08791 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ebf3O08791 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ebf3O08791 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Ebf3O08791 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ebf3O08791 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC12.3□□□□□ -0.44
Ebf3O08791 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms