Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
NpcdF8VQB8 Gm18263-201ENSMUST00000220846 1928 ntBASIC14.26□□□□□ -0.13
NpcdF8VQB8 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
NpcdF8VQB8 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC14.26□□□□□ -0.13
NpcdF8VQB8 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NpcdF8VQB8 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
NpcdF8VQB8 Gm11578-201ENSMUST00000118530 459 ntBASIC14.26□□□□□ -0.13
NpcdF8VQB8 Gm12274-201ENSMUST00000120062 385 ntBASIC14.26□□□□□ -0.13
NpcdF8VQB8 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NpcdF8VQB8 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC14.26□□□□□ -0.13
NpcdF8VQB8 Gm26982-201ENSMUST00000182250 1151 ntBASIC14.26□□□□□ -0.13
NpcdF8VQB8 Mrpl30-207ENSMUST00000195373 587 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
NpcdF8VQB8 Gm42816-201ENSMUST00000198433 325 ntBASIC14.26□□□□□ -0.13
NpcdF8VQB8 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
NpcdF8VQB8 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
NpcdF8VQB8 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NpcdF8VQB8 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NpcdF8VQB8 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC14.26□□□□□ -0.13
NpcdF8VQB8 AC166836.1-201ENSMUST00000219933 1795 ntBASIC14.26□□□□□ -0.13
NpcdF8VQB8 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NpcdF8VQB8 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NpcdF8VQB8 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
NpcdF8VQB8 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
NpcdF8VQB8 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
NpcdF8VQB8 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NpcdF8VQB8 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NpcdF8VQB8 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
NpcdF8VQB8 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
NpcdF8VQB8 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC14.25□□□□□ -0.13
NpcdF8VQB8 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NpcdF8VQB8 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NpcdF8VQB8 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NpcdF8VQB8 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NpcdF8VQB8 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
NpcdF8VQB8 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
NpcdF8VQB8 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
NpcdF8VQB8 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
NpcdF8VQB8 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NpcdF8VQB8 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NpcdF8VQB8 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC14.25□□□□□ -0.13
NpcdF8VQB8 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NpcdF8VQB8 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
NpcdF8VQB8 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
NpcdF8VQB8 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
NpcdF8VQB8 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC14.25□□□□□ -0.13
NpcdF8VQB8 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC14.25□□□□□ -0.13
NpcdF8VQB8 Gm9884-201ENSMUST00000194343 1222 ntBASIC14.25□□□□□ -0.13
NpcdF8VQB8 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC14.25□□□□□ -0.13
NpcdF8VQB8 Gm43912-201ENSMUST00000204352 538 ntBASIC14.25□□□□□ -0.13
NpcdF8VQB8 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
NpcdF8VQB8 Gm40761-201ENSMUST00000219123 1153 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NpcdF8VQB8 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
NpcdF8VQB8 Olfr584-201ENSMUST00000098210 964 ntBASIC14.25□□□□□ -0.13
NpcdF8VQB8 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
NpcdF8VQB8 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
NpcdF8VQB8 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NpcdF8VQB8 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
NpcdF8VQB8 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
NpcdF8VQB8 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
NpcdF8VQB8 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NpcdF8VQB8 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC14.24□□□□□ -0.13
NpcdF8VQB8 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC14.24□□□□□ -0.13
NpcdF8VQB8 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NpcdF8VQB8 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC14.24□□□□□ -0.13
NpcdF8VQB8 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NpcdF8VQB8 Rnf17-202ENSMUST00000223627 2077 ntBASIC14.24□□□□□ -0.13
NpcdF8VQB8 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NpcdF8VQB8 Sec13-201ENSMUST00000032440 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NpcdF8VQB8 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NpcdF8VQB8 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NpcdF8VQB8 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NpcdF8VQB8 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
NpcdF8VQB8 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NpcdF8VQB8 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
NpcdF8VQB8 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
NpcdF8VQB8 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
NpcdF8VQB8 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NpcdF8VQB8 Gm14247-201ENSMUST00000120950 237 ntBASIC14.24□□□□□ -0.13
NpcdF8VQB8 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NpcdF8VQB8 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NpcdF8VQB8 Gm3250-201ENSMUST00000167358 693 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
NpcdF8VQB8 Gm3238-201ENSMUST00000168298 693 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
NpcdF8VQB8 Gm17070-201ENSMUST00000170463 784 ntBASIC14.24□□□□□ -0.13
NpcdF8VQB8 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC14.24□□□□□ -0.13
NpcdF8VQB8 Gm42511-201ENSMUST00000196160 234 ntBASIC14.24□□□□□ -0.13
NpcdF8VQB8 Gm42433-201ENSMUST00000196806 940 ntBASIC14.24□□□□□ -0.13
NpcdF8VQB8 Gm43275-201ENSMUST00000202053 1020 ntBASIC14.24□□□□□ -0.13
NpcdF8VQB8 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NpcdF8VQB8 Gm8436-201ENSMUST00000210152 1080 ntBASIC14.24□□□□□ -0.13
NpcdF8VQB8 Gm5749-201ENSMUST00000210673 1090 ntBASIC14.24□□□□□ -0.13
NpcdF8VQB8 Ftl1-204ENSMUST00000210864 503 ntTSL 5 BASIC14.24□□□□□ -0.13
NpcdF8VQB8 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC14.24□□□□□ -0.13
NpcdF8VQB8 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC14.24□□□□□ -0.13
NpcdF8VQB8 AC122346.3-201ENSMUST00000223983 306 ntBASIC14.24□□□□□ -0.13
NpcdF8VQB8 AC112945.1-201ENSMUST00000226413 514 ntBASIC14.24□□□□□ -0.13
NpcdF8VQB8 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NpcdF8VQB8 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NpcdF8VQB8 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC14.24□□□□□ -0.13
NpcdF8VQB8 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
NpcdF8VQB8 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 2595.6 ms