Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Gm22614-201ENSMUST00000178300 165 ntBASIC12.16□□□□□ -0.46
Atf6F6VAN0 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC12.16□□□□□ -0.46
Atf6F6VAN0 AC159205.5-202ENSMUST00000224849 386 ntBASIC12.16□□□□□ -0.46
Atf6F6VAN0 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atf6F6VAN0 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atf6F6VAN0 Gm22042-201ENSMUST00000082989 165 ntBASIC12.16□□□□□ -0.46
Atf6F6VAN0 Gm26110-201ENSMUST00000083971 165 ntBASIC12.16□□□□□ -0.46
Atf6F6VAN0 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Atf6F6VAN0 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atf6F6VAN0 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atf6F6VAN0 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Atf6F6VAN0 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atf6F6VAN0 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC12.16□□□□□ -0.46
Atf6F6VAN0 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC12.16□□□□□ -0.46
Atf6F6VAN0 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atf6F6VAN0 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atf6F6VAN0 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atf6F6VAN0 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC12.16□□□□□ -0.46
Atf6F6VAN0 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atf6F6VAN0 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atf6F6VAN0 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atf6F6VAN0 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atf6F6VAN0 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atf6F6VAN0 Gm38116-201ENSMUST00000193873 1533 ntBASIC12.16□□□□□ -0.46
Atf6F6VAN0 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atf6F6VAN0 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC12.16□□□□□ -0.46
Atf6F6VAN0 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Atf6F6VAN0 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Atf6F6VAN0 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Atf6F6VAN0 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Atf6F6VAN0 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Atf6F6VAN0 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Atf6F6VAN0 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Atf6F6VAN0 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Atf6F6VAN0 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Atf6F6VAN0 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC12.15□□□□□ -0.46
Atf6F6VAN0 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Atf6F6VAN0 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC12.15□□□□□ -0.46
Atf6F6VAN0 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Atf6F6VAN0 Gm43984-201ENSMUST00000204572 2864 ntBASIC12.15□□□□□ -0.46
Atf6F6VAN0 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
Atf6F6VAN0 Gm4760-201ENSMUST00000119663 1030 ntBASIC12.15□□□□□ -0.46
Atf6F6VAN0 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC12.15□□□□□ -0.46
Atf6F6VAN0 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Atf6F6VAN0 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Atf6F6VAN0 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Atf6F6VAN0 Ighv5-7-201ENSMUST00000192302 244 ntBASIC12.15□□□□□ -0.46
Atf6F6VAN0 Gm19287-201ENSMUST00000203190 358 ntBASIC12.15□□□□□ -0.46
Atf6F6VAN0 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
Atf6F6VAN0 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Atf6F6VAN0 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
Atf6F6VAN0 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Atf6F6VAN0 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Atf6F6VAN0 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Atf6F6VAN0 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Atf6F6VAN0 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC12.15□□□□□ -0.46
Atf6F6VAN0 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Atf6F6VAN0 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Atf6F6VAN0 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Atf6F6VAN0 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Atf6F6VAN0 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Atf6F6VAN0 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Atf6F6VAN0 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC12.14□□□□□ -0.47
Atf6F6VAN0 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Atf6F6VAN0 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Atf6F6VAN0 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC12.14□□□□□ -0.47
Atf6F6VAN0 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Atf6F6VAN0 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC12.14□□□□□ -0.47
Atf6F6VAN0 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC12.14□□□□□ -0.47
Atf6F6VAN0 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Atf6F6VAN0 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Atf6F6VAN0 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Atf6F6VAN0 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Atf6F6VAN0 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Atf6F6VAN0 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC12.14□□□□□ -0.47
Atf6F6VAN0 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC12.14□□□□□ -0.47
Atf6F6VAN0 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Atf6F6VAN0 Gm26361-201ENSMUST00000158868 186 ntBASIC12.14□□□□□ -0.47
Atf6F6VAN0 Gm6114-201ENSMUST00000182472 968 ntBASIC12.14□□□□□ -0.47
Atf6F6VAN0 Gm9192-201ENSMUST00000183221 985 ntBASIC12.14□□□□□ -0.47
Atf6F6VAN0 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Atf6F6VAN0 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC12.14□□□□□ -0.47
Atf6F6VAN0 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
Atf6F6VAN0 Gm17812-201ENSMUST00000204935 318 ntBASIC12.14□□□□□ -0.47
Atf6F6VAN0 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Atf6F6VAN0 Olfr1347-205ENSMUST00000220413 964 ntBASIC12.14□□□□□ -0.47
Atf6F6VAN0 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Atf6F6VAN0 Ccl11-201ENSMUST00000000342 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Atf6F6VAN0 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Atf6F6VAN0 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC12.14□□□□□ -0.47
Atf6F6VAN0 Gm43807-201ENSMUST00000200678 1781 ntBASIC12.14□□□□□ -0.47
Atf6F6VAN0 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC12.14□□□□□ -0.47
Atf6F6VAN0 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Atf6F6VAN0 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Atf6F6VAN0 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Atf6F6VAN0 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Atf6F6VAN0 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Atf6F6VAN0 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Atf6F6VAN0 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Atf6F6VAN0 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms