Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Pcdh17E9PXF0 Gm43365-201ENSMUST00000196522 2106 ntBASIC11.06□□□□□ -0.64
Pcdh17E9PXF0 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh17E9PXF0 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC11.06□□□□□ -0.64
Pcdh17E9PXF0 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh17E9PXF0 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh17E9PXF0 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh17E9PXF0 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh17E9PXF0 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh17E9PXF0 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC11.06□□□□□ -0.64
Pcdh17E9PXF0 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh17E9PXF0 Gm44942-201ENSMUST00000096093 2072 ntBASIC11.05□□□□□ -0.64
Pcdh17E9PXF0 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Pcdh17E9PXF0 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh17E9PXF0 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh17E9PXF0 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh17E9PXF0 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Pcdh17E9PXF0 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh17E9PXF0 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh17E9PXF0 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh17E9PXF0 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh17E9PXF0 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Pcdh17E9PXF0 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC11.05□□□□□ -0.64
Pcdh17E9PXF0 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh17E9PXF0 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh17E9PXF0 Gm13461-201ENSMUST00000120980 662 ntBASIC11.05□□□□□ -0.64
Pcdh17E9PXF0 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC11.05□□□□□ -0.64
Pcdh17E9PXF0 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC11.05□□□□□ -0.64
Pcdh17E9PXF0 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC11.05□□□□□ -0.64
Pcdh17E9PXF0 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC11.05□□□□□ -0.64
Pcdh17E9PXF0 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC11.05□□□□□ -0.64
Pcdh17E9PXF0 Gm19459-201ENSMUST00000176240 835 ntBASIC11.05□□□□□ -0.64
Pcdh17E9PXF0 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
Pcdh17E9PXF0 Gm44126-201ENSMUST00000204831 514 ntBASIC11.05□□□□□ -0.64
Pcdh17E9PXF0 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Pcdh17E9PXF0 Gm45909-201ENSMUST00000212413 1031 ntBASIC11.05□□□□□ -0.64
Pcdh17E9PXF0 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh17E9PXF0 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh17E9PXF0 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh17E9PXF0 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh17E9PXF0 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh17E9PXF0 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh17E9PXF0 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh17E9PXF0 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC11.05□□□□□ -0.64
Pcdh17E9PXF0 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Pcdh17E9PXF0 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh17E9PXF0 Gm44913-201ENSMUST00000208060 2990 ntBASIC11.05□□□□□ -0.64
Pcdh17E9PXF0 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Pcdh17E9PXF0 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC11.05□□□□□ -0.64
Pcdh17E9PXF0 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh17E9PXF0 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh17E9PXF0 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh17E9PXF0 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh17E9PXF0 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC11.05□□□□□ -0.64
Pcdh17E9PXF0 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh17E9PXF0 Gm18983-201ENSMUST00000222884 2729 ntBASIC11.05□□□□□ -0.64
Pcdh17E9PXF0 Gm10152-201ENSMUST00000193475 1344 ntBASIC11.05□□□□□ -0.64
Pcdh17E9PXF0 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Pcdh17E9PXF0 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Pcdh17E9PXF0 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC11.05□□□□□ -0.64
Pcdh17E9PXF0 AC129336.1-201ENSMUST00000220224 2277 ntBASIC11.05□□□□□ -0.64
Pcdh17E9PXF0 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh17E9PXF0 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Pcdh17E9PXF0 Gm9129-201ENSMUST00000218173 1689 ntBASIC11.04□□□□□ -0.64
Pcdh17E9PXF0 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh17E9PXF0 AC160405.1-201ENSMUST00000218207 1545 ntBASIC11.04□□□□□ -0.64
Pcdh17E9PXF0 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC11.04□□□□□ -0.64
Pcdh17E9PXF0 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh17E9PXF0 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh17E9PXF0 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh17E9PXF0 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC11.04□□□□□ -0.64
Pcdh17E9PXF0 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh17E9PXF0 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh17E9PXF0 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Pcdh17E9PXF0 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
Pcdh17E9PXF0 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh17E9PXF0 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC11.04□□□□□ -0.64
Pcdh17E9PXF0 Gm37131-201ENSMUST00000192502 1561 ntBASIC11.04□□□□□ -0.64
Pcdh17E9PXF0 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh17E9PXF0 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
Pcdh17E9PXF0 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh17E9PXF0 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh17E9PXF0 Gm13809-201ENSMUST00000117921 597 ntBASIC11.04□□□□□ -0.64
Pcdh17E9PXF0 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh17E9PXF0 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC11.04□□□□□ -0.64
Pcdh17E9PXF0 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC11.04□□□□□ -0.64
Pcdh17E9PXF0 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC11.04□□□□□ -0.64
Pcdh17E9PXF0 Gm6397-201ENSMUST00000161973 1069 ntBASIC11.04□□□□□ -0.64
Pcdh17E9PXF0 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Pcdh17E9PXF0 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC11.04□□□□□ -0.64
Pcdh17E9PXF0 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Pcdh17E9PXF0 Mir6546-201ENSMUST00000184460 62 ntBASIC11.04□□□□□ -0.64
Pcdh17E9PXF0 Gm4034-201ENSMUST00000187674 480 ntBASIC11.04□□□□□ -0.64
Pcdh17E9PXF0 Gm10774-201ENSMUST00000188689 204 ntBASIC11.04□□□□□ -0.64
Pcdh17E9PXF0 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh17E9PXF0 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC11.04□□□□□ -0.64
Pcdh17E9PXF0 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC11.04□□□□□ -0.64
Pcdh17E9PXF0 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh17E9PXF0 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Pcdh17E9PXF0 AC098716.1-201ENSMUST00000213527 703 ntBASIC11.04□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 122.7 ms