Protein–RNA interactions for Protein: D3Z4R4

Nkx6-2, NK6 homeobox 2, mousemouse

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-2D3Z4R4 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Nkx6-2D3Z4R4 Gm44344-201ENSMUST00000200287 129 ntBASIC9.53□□□□□ -0.88
Nkx6-2D3Z4R4 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Nkx6-2D3Z4R4 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Nkx6-2D3Z4R4 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Nkx6-2D3Z4R4 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Nkx6-2D3Z4R4 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Nkx6-2D3Z4R4 Mir339-201ENSMUST00000083659 96 ntBASIC9.53□□□□□ -0.88
Nkx6-2D3Z4R4 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Nkx6-2D3Z4R4 Cr1l-204ENSMUST00000193094 2776 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Nkx6-2D3Z4R4 Elovl5-201ENSMUST00000034904 2782 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Nkx6-2D3Z4R4 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
Nkx6-2D3Z4R4 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Nkx6-2D3Z4R4 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC9.53□□□□□ -0.88
Nkx6-2D3Z4R4 Vmn1r184-207ENSMUST00000228369 6361 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
Nkx6-2D3Z4R4 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Nkx6-2D3Z4R4 Ctcfl-201ENSMUST00000094287 3217 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Nkx6-2D3Z4R4 Gckr-202ENSMUST00000201166 2272 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Nkx6-2D3Z4R4 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Nkx6-2D3Z4R4 A1cf-201ENSMUST00000075838 2989 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Nkx6-2D3Z4R4 Ces2h-201ENSMUST00000172032 2445 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Nkx6-2D3Z4R4 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Nkx6-2D3Z4R4 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Nkx6-2D3Z4R4 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Nkx6-2D3Z4R4 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Nkx6-2D3Z4R4 Slc12a6-204ENSMUST00000110991 4556 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Nkx6-2D3Z4R4 Peg3-201ENSMUST00000051209 8694 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Nkx6-2D3Z4R4 Angptl2-201ENSMUST00000004208 3339 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Nkx6-2D3Z4R4 Cyp2b10-202ENSMUST00000072438 1916 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.88
Nkx6-2D3Z4R4 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.88
Nkx6-2D3Z4R4 Adra1a-202ENSMUST00000159068 4282 ntAPPRIS P1 TSL 2 BASIC9.52□□□□□ -0.88
Nkx6-2D3Z4R4 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC9.52□□□□□ -0.88
Nkx6-2D3Z4R4 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Nkx6-2D3Z4R4 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Nkx6-2D3Z4R4 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
Nkx6-2D3Z4R4 Stard4-201ENSMUST00000025236 5097 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Nkx6-2D3Z4R4 Ttc16-206ENSMUST00000161430 2874 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
Nkx6-2D3Z4R4 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Nkx6-2D3Z4R4 Atl2-201ENSMUST00000068282 3618 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Nkx6-2D3Z4R4 Dip2c-202ENSMUST00000169960 4801 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Nkx6-2D3Z4R4 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Nkx6-2D3Z4R4 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC9.52□□□□□ -0.89
Nkx6-2D3Z4R4 Gm12384-201ENSMUST00000119228 919 ntBASIC9.52□□□□□ -0.89
Nkx6-2D3Z4R4 Gm12036-201ENSMUST00000120008 530 ntBASIC9.52□□□□□ -0.89
Nkx6-2D3Z4R4 Nfyc-204ENSMUST00000120779 2006 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Nkx6-2D3Z4R4 Gm11400-201ENSMUST00000120853 1214 ntBASIC9.52□□□□□ -0.89
Nkx6-2D3Z4R4 Gm11978-201ENSMUST00000122315 466 ntBASIC9.52□□□□□ -0.89
Nkx6-2D3Z4R4 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC9.52□□□□□ -0.89
Nkx6-2D3Z4R4 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Nkx6-2D3Z4R4 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC9.52□□□□□ -0.89
Nkx6-2D3Z4R4 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC9.52□□□□□ -0.89
Nkx6-2D3Z4R4 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC9.52□□□□□ -0.89
Nkx6-2D3Z4R4 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC9.52□□□□□ -0.89
Nkx6-2D3Z4R4 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Nkx6-2D3Z4R4 Gm27680-201ENSMUST00000184192 160 ntBASIC9.52□□□□□ -0.89
Nkx6-2D3Z4R4 Ntrk3-206ENSMUST00000195262 2774 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
Nkx6-2D3Z4R4 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC9.52□□□□□ -0.89
Nkx6-2D3Z4R4 Ighv8-10-201ENSMUST00000199579 358 ntBASIC9.52□□□□□ -0.89
Nkx6-2D3Z4R4 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC9.52□□□□□ -0.89
Nkx6-2D3Z4R4 AC115891.3-201ENSMUST00000219161 2472 ntBASIC9.52□□□□□ -0.89
Nkx6-2D3Z4R4 AC154846.1-201ENSMUST00000226278 862 ntBASIC9.52□□□□□ -0.89
Nkx6-2D3Z4R4 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Nkx6-2D3Z4R4 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Nkx6-2D3Z4R4 Oprm1-204ENSMUST00000063036 1427 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Nkx6-2D3Z4R4 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
Nkx6-2D3Z4R4 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Nkx6-2D3Z4R4 Aldh1a3-201ENSMUST00000015278 3443 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Nkx6-2D3Z4R4 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Nkx6-2D3Z4R4 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
Nkx6-2D3Z4R4 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Nkx6-2D3Z4R4 Tgfbrap1-201ENSMUST00000095014 5607 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Nkx6-2D3Z4R4 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Nkx6-2D3Z4R4 Copb1-201ENSMUST00000033012 3346 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Nkx6-2D3Z4R4 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC9.52□□□□□ -0.89
Nkx6-2D3Z4R4 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Nkx6-2D3Z4R4 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Nkx6-2D3Z4R4 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Nkx6-2D3Z4R4 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Nkx6-2D3Z4R4 Npc1l1-201ENSMUST00000004505 4467 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Nkx6-2D3Z4R4 Gm44755-201ENSMUST00000207830 2102 ntBASIC9.52□□□□□ -0.89
Nkx6-2D3Z4R4 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC9.52□□□□□ -0.89
Nkx6-2D3Z4R4 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Nkx6-2D3Z4R4 Gm29895-201ENSMUST00000209933 5652 ntTSL 5 BASIC9.51□□□□□ -0.89
Nkx6-2D3Z4R4 Fer1l5-202ENSMUST00000179162 6315 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Nkx6-2D3Z4R4 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Nkx6-2D3Z4R4 Aktip-203ENSMUST00000120349 2153 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Nkx6-2D3Z4R4 N6amt1-204ENSMUST00000120284 3473 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Nkx6-2D3Z4R4 5830411N06Rik-203ENSMUST00000164583 3342 ntAPPRIS P4 TSL 1 (best) BASIC9.51□□□□□ -0.89
Nkx6-2D3Z4R4 Syn2-203ENSMUST00000203450 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Nkx6-2D3Z4R4 Chd1-201ENSMUST00000024620 3196 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Nkx6-2D3Z4R4 Gm37031-201ENSMUST00000195487 2530 ntBASIC9.51□□□□□ -0.89
Nkx6-2D3Z4R4 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Nkx6-2D3Z4R4 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Nkx6-2D3Z4R4 Gria1-201ENSMUST00000036315 5546 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Nkx6-2D3Z4R4 Loxl4-201ENSMUST00000026190 3738 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Nkx6-2D3Z4R4 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Nkx6-2D3Z4R4 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Nkx6-2D3Z4R4 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Nkx6-2D3Z4R4 Gm16478-201ENSMUST00000208113 5084 ntBASIC9.51□□□□□ -0.89
Nkx6-2D3Z4R4 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms