Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Ubr4A2AN08 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Ubr4A2AN08 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Ubr4A2AN08 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Ubr4A2AN08 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Ubr4A2AN08 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Ubr4A2AN08 Gm45199-201ENSMUST00000207640 1507 ntBASIC6.04□□□□□ -1.44
Ubr4A2AN08 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
Ubr4A2AN08 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Ubr4A2AN08 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC6.04□□□□□ -1.44
Ubr4A2AN08 Ighv1-9-201ENSMUST00000103498 348 ntAPPRIS ALT2 BASIC6.04□□□□□ -1.44
Ubr4A2AN08 Gm22198-201ENSMUST00000122659 307 ntBASIC6.04□□□□□ -1.44
Ubr4A2AN08 Hyal1-203ENSMUST00000123005 843 ntTSL 3 BASIC6.04□□□□□ -1.44
Ubr4A2AN08 Elof1-201ENSMUST00000013966 888 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Ubr4A2AN08 Gm11454-201ENSMUST00000144092 714 ntTSL 3 BASIC6.04□□□□□ -1.44
Ubr4A2AN08 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Ubr4A2AN08 Rab11a-204ENSMUST00000167569 726 ntTSL 3 BASIC6.04□□□□□ -1.44
Ubr4A2AN08 Rpl15-ps2-201ENSMUST00000184247 613 ntBASIC6.04□□□□□ -1.44
Ubr4A2AN08 1700048F04Rik-201ENSMUST00000199057 1064 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Ubr4A2AN08 AC108416.3-201ENSMUST00000226148 557 ntBASIC6.04□□□□□ -1.44
Ubr4A2AN08 Krtap21-1-201ENSMUST00000078422 748 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Ubr4A2AN08 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Ubr4A2AN08 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Ubr4A2AN08 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Ubr4A2AN08 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
Ubr4A2AN08 Gm38220-201ENSMUST00000195774 1447 ntBASIC6.04□□□□□ -1.44
Ubr4A2AN08 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Ubr4A2AN08 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Ubr4A2AN08 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Ubr4A2AN08 Gm43134-201ENSMUST00000199434 1886 ntBASIC6.04□□□□□ -1.44
Ubr4A2AN08 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC6.04□□□□□ -1.44
Ubr4A2AN08 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Ubr4A2AN08 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Ubr4A2AN08 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC6.04□□□□□ -1.44
Ubr4A2AN08 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Ubr4A2AN08 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Ubr4A2AN08 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC6.04□□□□□ -1.44
Ubr4A2AN08 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
Ubr4A2AN08 Fsip1-202ENSMUST00000028821 1673 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Ubr4A2AN08 Gm15355-201ENSMUST00000118929 285 ntBASIC6.04□□□□□ -1.44
Ubr4A2AN08 Gm15374-201ENSMUST00000119313 844 ntBASIC6.04□□□□□ -1.44
Ubr4A2AN08 Gm7138-201ENSMUST00000167669 693 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Ubr4A2AN08 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC6.04□□□□□ -1.44
Ubr4A2AN08 Gm8704-201ENSMUST00000197181 435 ntBASIC6.04□□□□□ -1.44
Ubr4A2AN08 Gm43551-201ENSMUST00000197221 440 ntBASIC6.04□□□□□ -1.44
Ubr4A2AN08 Igkv12-42-201ENSMUST00000198769 327 ntBASIC6.04□□□□□ -1.44
Ubr4A2AN08 Gm3922-201ENSMUST00000200519 435 ntBASIC6.04□□□□□ -1.44
Ubr4A2AN08 Gm9273-201ENSMUST00000200606 715 ntBASIC6.04□□□□□ -1.44
Ubr4A2AN08 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC6.04□□□□□ -1.44
Ubr4A2AN08 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Ubr4A2AN08 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Ubr4A2AN08 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Ubr4A2AN08 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Ubr4A2AN08 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Ubr4A2AN08 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Ubr4A2AN08 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Ubr4A2AN08 Msrb1-202ENSMUST00000115262 886 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Ubr4A2AN08 Gm13758-201ENSMUST00000118699 743 ntBASIC6.04□□□□□ -1.44
Ubr4A2AN08 Gm13781-201ENSMUST00000124153 492 ntTSL 2 BASIC6.04□□□□□ -1.44
Ubr4A2AN08 Wdr17-204ENSMUST00000129132 1043 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Ubr4A2AN08 Gm5982-201ENSMUST00000196234 512 ntBASIC6.04□□□□□ -1.44
Ubr4A2AN08 Gm33024-201ENSMUST00000203143 633 ntTSL 3 BASIC6.04□□□□□ -1.44
Ubr4A2AN08 AC159002.1-201ENSMUST00000226714 924 ntBASIC6.04□□□□□ -1.44
Ubr4A2AN08 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC6.04□□□□□ -1.44
Ubr4A2AN08 Gm9415-201ENSMUST00000200462 1321 ntBASIC6.04□□□□□ -1.44
Ubr4A2AN08 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Ubr4A2AN08 Nr1i3-201ENSMUST00000005820 1414 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
Ubr4A2AN08 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Ubr4A2AN08 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC6.04□□□□□ -1.44
Ubr4A2AN08 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Ubr4A2AN08 Galntl5-201ENSMUST00000030778 1627 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Ubr4A2AN08 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC6.04□□□□□ -1.44
Ubr4A2AN08 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Ubr4A2AN08 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Ubr4A2AN08 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Ubr4A2AN08 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC6.03□□□□□ -1.44
Ubr4A2AN08 Asgr1-203ENSMUST00000108585 1169 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
Ubr4A2AN08 Ap5s1-202ENSMUST00000110206 703 ntTSL 3 BASIC6.03□□□□□ -1.44
Ubr4A2AN08 2610203C22Rik-201ENSMUST00000115480 1246 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Ubr4A2AN08 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
Ubr4A2AN08 2210408F21Rik-209ENSMUST00000146778 579 ntTSL 5 BASIC6.03□□□□□ -1.44
Ubr4A2AN08 Gm44323-201ENSMUST00000198689 129 ntBASIC6.03□□□□□ -1.44
Ubr4A2AN08 Ccl25-201ENSMUST00000024004 1058 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Ubr4A2AN08 Catsperz-201ENSMUST00000057716 781 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Ubr4A2AN08 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Ubr4A2AN08 Gm18983-201ENSMUST00000222884 2729 ntBASIC6.03□□□□□ -1.44
Ubr4A2AN08 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
Ubr4A2AN08 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC6.03□□□□□ -1.44
Ubr4A2AN08 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
Ubr4A2AN08 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Ubr4A2AN08 Gm44106-201ENSMUST00000203153 1599 ntBASIC6.03□□□□□ -1.44
Ubr4A2AN08 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Ubr4A2AN08 Gm31108-201ENSMUST00000204101 1633 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Ubr4A2AN08 Gm33466-201ENSMUST00000199819 1689 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Ubr4A2AN08 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Ubr4A2AN08 Wfdc8-202ENSMUST00000109338 1794 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
Ubr4A2AN08 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Ubr4A2AN08 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Ubr4A2AN08 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Ubr4A2AN08 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms