Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Cfap99A0A140LIX9 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC14.16□□□□□ -0.14
Cfap99A0A140LIX9 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC14.16□□□□□ -0.14
Cfap99A0A140LIX9 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cfap99A0A140LIX9 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cfap99A0A140LIX9 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cfap99A0A140LIX9 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cfap99A0A140LIX9 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cfap99A0A140LIX9 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cfap99A0A140LIX9 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cfap99A0A140LIX9 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cfap99A0A140LIX9 Gm42829-201ENSMUST00000198417 2585 ntBASIC14.16□□□□□ -0.14
Cfap99A0A140LIX9 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Cfap99A0A140LIX9 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cfap99A0A140LIX9 Gm4993-201ENSMUST00000118719 1174 ntBASIC14.16□□□□□ -0.14
Cfap99A0A140LIX9 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC14.16□□□□□ -0.14
Cfap99A0A140LIX9 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC14.16□□□□□ -0.14
Cfap99A0A140LIX9 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC14.16□□□□□ -0.14
Cfap99A0A140LIX9 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cfap99A0A140LIX9 Gm5778-201ENSMUST00000171003 1072 ntBASIC14.16□□□□□ -0.14
Cfap99A0A140LIX9 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC14.16□□□□□ -0.14
Cfap99A0A140LIX9 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC14.16□□□□□ -0.14
Cfap99A0A140LIX9 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Cfap99A0A140LIX9 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cfap99A0A140LIX9 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cfap99A0A140LIX9 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cfap99A0A140LIX9 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC14.16□□□□□ -0.14
Cfap99A0A140LIX9 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cfap99A0A140LIX9 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cfap99A0A140LIX9 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cfap99A0A140LIX9 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cfap99A0A140LIX9 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC14.16□□□□□ -0.14
Cfap99A0A140LIX9 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cfap99A0A140LIX9 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC14.16□□□□□ -0.14
Cfap99A0A140LIX9 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cfap99A0A140LIX9 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cfap99A0A140LIX9 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cfap99A0A140LIX9 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cfap99A0A140LIX9 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cfap99A0A140LIX9 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC14.16□□□□□ -0.14
Cfap99A0A140LIX9 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cfap99A0A140LIX9 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Cfap99A0A140LIX9 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Cfap99A0A140LIX9 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cfap99A0A140LIX9 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cfap99A0A140LIX9 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cfap99A0A140LIX9 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cfap99A0A140LIX9 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cfap99A0A140LIX9 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cfap99A0A140LIX9 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Cfap99A0A140LIX9 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Cfap99A0A140LIX9 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cfap99A0A140LIX9 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC14.15□□□□□ -0.14
Cfap99A0A140LIX9 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cfap99A0A140LIX9 AC164107.1-201ENSMUST00000227730 2161 ntBASIC14.15□□□□□ -0.14
Cfap99A0A140LIX9 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cfap99A0A140LIX9 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cfap99A0A140LIX9 Gm13809-201ENSMUST00000117921 597 ntBASIC14.15□□□□□ -0.14
Cfap99A0A140LIX9 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC14.15□□□□□ -0.14
Cfap99A0A140LIX9 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cfap99A0A140LIX9 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Cfap99A0A140LIX9 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cfap99A0A140LIX9 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cfap99A0A140LIX9 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cfap99A0A140LIX9 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC14.15□□□□□ -0.14
Cfap99A0A140LIX9 Mir7686-201ENSMUST00000200604 57 ntBASIC14.15□□□□□ -0.14
Cfap99A0A140LIX9 Gm35960-201ENSMUST00000202712 767 ntBASIC14.15□□□□□ -0.14
Cfap99A0A140LIX9 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC14.15□□□□□ -0.14
Cfap99A0A140LIX9 Gm9132-201ENSMUST00000210182 832 ntBASIC14.15□□□□□ -0.14
Cfap99A0A140LIX9 Gm45398-201ENSMUST00000210561 165 ntBASIC14.15□□□□□ -0.14
Cfap99A0A140LIX9 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC14.15□□□□□ -0.14
Cfap99A0A140LIX9 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cfap99A0A140LIX9 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cfap99A0A140LIX9 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cfap99A0A140LIX9 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cfap99A0A140LIX9 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cfap99A0A140LIX9 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Cfap99A0A140LIX9 Gm44806-201ENSMUST00000205574 2303 ntBASIC14.15□□□□□ -0.14
Cfap99A0A140LIX9 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cfap99A0A140LIX9 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cfap99A0A140LIX9 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cfap99A0A140LIX9 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cfap99A0A140LIX9 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cfap99A0A140LIX9 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cfap99A0A140LIX9 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Cfap99A0A140LIX9 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.15
Cfap99A0A140LIX9 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cfap99A0A140LIX9 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Cfap99A0A140LIX9 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cfap99A0A140LIX9 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cfap99A0A140LIX9 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cfap99A0A140LIX9 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cfap99A0A140LIX9 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cfap99A0A140LIX9 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Cfap99A0A140LIX9 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Cfap99A0A140LIX9 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC14.14□□□□□ -0.15
Cfap99A0A140LIX9 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cfap99A0A140LIX9 Gm11511-201ENSMUST00000118146 540 ntBASIC14.14□□□□□ -0.15
Cfap99A0A140LIX9 Gm6397-201ENSMUST00000161973 1069 ntBASIC14.14□□□□□ -0.15
Cfap99A0A140LIX9 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms